Task 38684978

Name test_629-GPUGRID_TEST_ATM_40STEP_20261023-31-40-RND4532_0
Workunit 31626476
Created 27 Oct 2026, 18:52:04 UTC
Sent 27 Oct 2026, 18:52:06 UTC
Report deadline 1 Nov 2026, 18:52:06 UTC
Received 28 Oct 2026, 5:11:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652253
Run time 1 hours 3 min 59 sec
CPU time 1 hours 0 min 34 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,168.74 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.43 MB
Peak swap size 6.92 GB
Peak disk usage 3.11 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:30:53 (8712): wrapper (7.9.26016): starting
21:30:53 (8712): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:30:55 (8712): Library/usr/bin/tar.exe exited; CPU time 0.015625
21:30:55 (8712): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\13\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\13\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:32:37 (8712): C:/Windows/system32/cmd.exe exited; CPU time 3634.625000
22:32:37 (8712): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 75905555 bytes.
Dumping objects ->
{3835893} normal block at 0x000002143E6875D0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835882} normal block at 0x000002143E687560, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835871} normal block at 0x000002143E687020, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835860} normal block at 0x000002143E687090, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835849} normal block at 0x000002143E686ED0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835818} normal block at 0x00000214402E5250, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835805} normal block at 0x000002143E680460, 8 bytes long.
 Data: <  &#168;>    > 00 00 A8 3E 14 02 00 00 
{3833957} normal block at 0x000002143E6802D0, 8 bytes long.
 Data: <p&#176;j>    > 70 B0 6A 3E 14 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000002143E6827E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002143E6776D0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000002143E6863B0, 16 bytes long.
 Data: < mh>            > 88 6D 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002143E6868B0, 16 bytes long.
 Data: <`mh>            > 60 6D 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002143E681110, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000002143E686770, 16 bytes long.
 Data: <8mh>            > 38 6D 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002143E685AF0, 16 bytes long.
 Data: < mh>            > 10 6D 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002143E685C80, 16 bytes long.
 Data: <&#232;lh>            > E8 6C 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002143E686540, 16 bytes long.
 Data: <&#192;lh>            > C0 6C 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002143E687250, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000002143E6864F0, 16 bytes long.
 Data: <X&#181;f>            > 58 B5 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002143E681A10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000002143E686090, 16 bytes long.
 Data: <0&#181;f>            > 30 B5 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002143E686450, 16 bytes long.
 Data: < &#181;f>            > 08 B5 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002143E686400, 16 bytes long.
 Data: <&#224;&#180;f>            > E0 B4 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002143E686680, 16 bytes long.
 Data: <&#184;&#180;f>            > B8 B4 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002143E686950, 16 bytes long.
 Data: < &#180;f>            > 90 B4 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002143E686860, 16 bytes long.
 Data: <h&#180;f>            > 68 B4 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002143E681050, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000002143E686360, 16 bytes long.
 Data: <@&#180;f>            > 40 B4 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002143E66B440, 320 bytes long.
 Data: <`ch>    P h>    > 60 63 68 3E 14 02 00 00 50 10 68 3E 14 02 00 00 
{274} normal block at 0x000002143E6860E0, 16 bytes long.
 Data: <&#160;lh>            > A0 6C 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002143E686310, 16 bytes long.
 Data: <xlh>            > 78 6C 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002143E680CF0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000002143E6869F0, 16 bytes long.
 Data: <Plh>            > 50 6C 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002143E680ED0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000002143E6869A0, 16 bytes long.
 Data: < kh>            > 98 6B 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002143E686270, 16 bytes long.
 Data: <pkh>            > 70 6B 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002143E6866D0, 16 bytes long.
 Data: <Hkh>            > 48 6B 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002143E686040, 16 bytes long.
 Data: < kh>            > 20 6B 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002143E685AA0, 16 bytes long.
 Data: <&#248;jh>            > F8 6A 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002143E686180, 16 bytes long.
 Data: <&#208;jh>            > D0 6A 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002143E686220, 16 bytes long.
 Data: <&#160; g>            > A0 0B 67 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002143E670BA0, 40 bytes long.
 Data: < bh>    PR.@    > 20 62 68 3E 14 02 00 00 50 52 2E 40 14 02 00 00 
{260} normal block at 0x000002143E685E10, 16 bytes long.
 Data: <&#176;jh>            > B0 6A 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002143E6862C0, 16 bytes long.
 Data: < jh>            > 88 6A 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002143E681530, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000002143E6861D0, 16 bytes long.
 Data: <`jh>            > 60 6A 68 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002143E686A60, 992 bytes long.
 Data: <&#208;ah>    0 h>    > D0 61 68 3E 14 02 00 00 30 15 68 3E 14 02 00 00 
{92} normal block at 0x000002143E681170, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000002143E680640, 16 bytes long.
 Data: <&#192;&#198;f>            > C0 C6 66 3E 14 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000002143E66C6C0, 40 bytes long.
 Data: <@ h>    p h>    > 40 06 68 3E 14 02 00 00 70 11 68 3E 14 02 00 00 
{69} normal block at 0x000002143E67FD30, 16 bytes long.
 Data: < &#234;&#251;&#253;&#247;           > 80 EA FB FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002143E6800F0, 16 bytes long.
 Data: <@&#233;&#251;&#253;&#247;           > 40 E9 FB FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002143E6800A0, 16 bytes long.
 Data: <&#248;W&#248;&#253;&#247;           > F8 57 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002143E67FB50, 16 bytes long.
 Data: <&#216;W&#248;&#253;&#247;           > D8 57 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002143E680780, 16 bytes long.
 Data: <P &#248;&#253;&#247;           > 50 04 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002143E680190, 16 bytes long.
 Data: <0 &#248;&#253;&#247;           > 30 04 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002143E680370, 16 bytes long.
 Data: <&#224; &#248;&#253;&#247;           > E0 02 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002143E6807D0, 16 bytes long.
 Data: <  &#248;&#253;&#247;           > 10 04 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002143E680A50, 16 bytes long.
 Data: <p &#248;&#253;&#247;           > 70 04 F8 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002143E680550, 16 bytes long.
 Data: < &#192;&#246;&#253;&#247;           > 18 C0 F6 FD F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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