Task 38684899

Name test_136-GPUGRID_TEST_ATM_40STEP_20261023-31-40-RND5696_0
Workunit 31626398
Created 27 Oct 2026, 18:27:41 UTC
Sent 27 Oct 2026, 18:27:47 UTC
Report deadline 1 Nov 2026, 18:27:47 UTC
Received 27 Oct 2026, 23:53:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 647670
Run time 39 min 46 sec
CPU time 37 min 32 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,117.86 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 691.44 MB
Peak swap size 6.86 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.15</core_client_version>
<![CDATA[
<stderr_txt>
00:15:23 (5708): wrapper (7.9.26016): starting
00:15:23 (5708): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:15:24 (5708): Library/usr/bin/tar.exe exited; CPU time 0.015625
00:15:24 (5708): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:53:36 (5708): C:/Windows/system32/cmd.exe exited; CPU time 2252.265625
00:53:36 (5708): called boinc_finish(0)
0 bytes in 0 Free Blocks.
544 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 39158609 bytes.
Dumping objects ->
{3835240} normal block at 0x000001DA82686070, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x000001DA82685D60, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x000001DA82685E40, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835207} normal block at 0x000001DA82685F20, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835196} normal block at 0x000001DA82685C10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835165} normal block at 0x000001DA8436B290, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x000001DA826DDA20, 144 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835151} normal block at 0x000001DA82680300, 8 bytes long.
 Data: <  &#175;&#130;&#218;   > 00 00 AF 82 DA 01 00 00 
{3834552} normal block at 0x000001DA826DD2D0, 144 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001DA8267F9F0, 8 bytes long.
 Data: < &#233;u&#130;&#218;   > 90 E9 75 82 DA 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001DA82681830, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001DA82676BD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001DA82686C70, 16 bytes long.
 Data: < vh&#130;&#218;           > 18 76 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001DA82686220, 16 bytes long.
 Data: <&#240;uh&#130;&#218;           > F0 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001DA82680D20, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001DA82686E50, 16 bytes long.
 Data: <&#200;uh&#130;&#218;           > C8 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001DA826864F0, 16 bytes long.
 Data: <&#160;uh&#130;&#218;           > A0 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001DA82686C20, 16 bytes long.
 Data: <xuh&#130;&#218;           > 78 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001DA82686720, 16 bytes long.
 Data: <Puh&#130;&#218;           > 50 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001DA82685C80, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001DA82686FE0, 16 bytes long.
 Data: <&#184;&#155;g&#130;&#218;           > B8 9B 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001DA82680CC0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001DA82686DB0, 16 bytes long.
 Data: < &#155;g&#130;&#218;           > 90 9B 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001DA82686450, 16 bytes long.
 Data: <h&#155;g&#130;&#218;           > 68 9B 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001DA826861D0, 16 bytes long.
 Data: <@&#155;g&#130;&#218;           > 40 9B 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001DA82686900, 16 bytes long.
 Data: < &#155;g&#130;&#218;           > 18 9B 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001DA82686D60, 16 bytes long.
 Data: <&#240;&#154;g&#130;&#218;           > F0 9A 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001DA82686E00, 16 bytes long.
 Data: <&#200;&#154;g&#130;&#218;           > C8 9A 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001DA826808A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001DA82686F90, 16 bytes long.
 Data: <&#160;&#154;g&#130;&#218;           > A0 9A 67 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001DA82679AA0, 320 bytes long.
 Data: < oh&#130;&#218;   &#160; h&#130;&#218;   > 90 6F 68 82 DA 01 00 00 A0 08 68 82 DA 01 00 00 
{274} normal block at 0x000001DA826864A0, 16 bytes long.
 Data: <0uh&#130;&#218;           > 30 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001DA82686310, 16 bytes long.
 Data: < uh&#130;&#218;           > 08 75 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001DA82680C60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001DA826866D0, 16 bytes long.
 Data: <&#224;th&#130;&#218;           > E0 74 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001DA82680F60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001DA82686F40, 16 bytes long.
 Data: <(th&#130;&#218;           > 28 74 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001DA82686360, 16 bytes long.
 Data: < th&#130;&#218;           > 00 74 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001DA82686A90, 16 bytes long.
 Data: <&#216;sh&#130;&#218;           > D8 73 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001DA82686180, 16 bytes long.
 Data: <&#176;sh&#130;&#218;           > B0 73 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001DA82686B80, 16 bytes long.
 Data: < sh&#130;&#218;           > 88 73 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001DA826870D0, 16 bytes long.
 Data: <`sh&#130;&#218;           > 60 73 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001DA826865E0, 16 bytes long.
 Data: <0[h&#130;&#218;           > 30 5B 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001DA82685B30, 40 bytes long.
 Data: <&#224;eh&#130;&#218;    &#178;6&#132;&#218;   > E0 65 68 82 DA 01 00 00 90 B2 36 84 DA 01 00 00 
{260} normal block at 0x000001DA82686590, 16 bytes long.
 Data: <@sh&#130;&#218;           > 40 73 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001DA82686680, 16 bytes long.
 Data: < sh&#130;&#218;           > 18 73 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001DA826813E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001DA826869F0, 16 bytes long.
 Data: <&#240;rh&#130;&#218;           > F0 72 68 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001DA826872F0, 992 bytes long.
 Data: <&#240;ih&#130;&#218;   &#224; h&#130;&#218;   > F0 69 68 82 DA 01 00 00 E0 13 68 82 DA 01 00 00 
{92} normal block at 0x000001DA82681140, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001DA82680210, 16 bytes long.
 Data: <&#224;&#226;f&#130;&#218;           > E0 E2 66 82 DA 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001DA8266E2E0, 40 bytes long.
 Data: <  h&#130;&#218;   @ h&#130;&#218;   > 10 02 68 82 DA 01 00 00 40 11 68 82 DA 01 00 00 
{69} normal block at 0x000001DA8267FC70, 16 bytes long.
 Data: < &#234;4 &#247;           > 80 EA 34 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001DA826803A0, 16 bytes long.
 Data: <@&#233;4 &#247;           > 40 E9 34 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001DA826802B0, 16 bytes long.
 Data: <&#248;W1 &#247;           > F8 57 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001DA8267F680, 16 bytes long.
 Data: <&#216;W1 &#247;           > D8 57 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001DA8267FA90, 16 bytes long.
 Data: <P 1 &#247;           > 50 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001DA8267FBD0, 16 bytes long.
 Data: <0 1 &#247;           > 30 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001DA8267F9A0, 16 bytes long.
 Data: <&#224; 1 &#247;           > E0 02 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001DA8267F900, 16 bytes long.
 Data: <  1 &#247;           > 10 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001DA8267FB30, 16 bytes long.
 Data: <p 1 &#247;           > 70 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001DA8267FAE0, 16 bytes long.
 Data: < &#192;/ &#247;           > 18 C0 2F 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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