Task 38684857

Name test_914-GPUGRID_TEST_ATM_40STEP_20261023-15-40-RND4515_0
Workunit 31626358
Created 27 Oct 2026, 18:18:07 UTC
Sent 27 Oct 2026, 18:18:09 UTC
Report deadline 1 Nov 2026, 18:18:09 UTC
Received 28 Oct 2026, 16:26:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 590858
Run time 23 min 19 sec
CPU time 22 min 11 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 16,266.02 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 705.78 MB
Peak swap size 3.98 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
17:02:05 (3348): wrapper (7.9.26016): starting
17:02:05 (3348): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:02:06 (3348): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:02:06 (3348): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:24:56 (3348): C:/Windows/system32/cmd.exe exited; CPU time 1331.390625
17:24:56 (3348): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23658297 bytes.
Dumping objects ->
{3835503} normal block at 0x0000029C611D4930, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835492} normal block at 0x0000029C611D4770, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x0000029C611D4700, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835470} normal block at 0x0000029C611D43F0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835459} normal block at 0x0000029C5F575E00, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835428} normal block at 0x0000029C61145B90, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835415} normal block at 0x0000029C5F56E220, 8 bytes long.
 Data: <  R_&#156;   > 00 00 52 5F 9C 02 00 00 
{3833963} normal block at 0x0000029C5F56DB40, 8 bytes long.
 Data: < &#234; a&#156;   > 90 EA 05 61 9C 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x0000029C5F572120, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000029C5F566490, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x0000029C5F5760D0, 16 bytes long.
 Data: <&#184;sW_&#156;           > B8 73 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000029C5F577020, 16 bytes long.
 Data: < sW_&#156;           > 90 73 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000029C5F570370, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x0000029C5F5765D0, 16 bytes long.
 Data: <hsW_&#156;           > 68 73 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000029C5F576F30, 16 bytes long.
 Data: <@sW_&#156;           > 40 73 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000029C5F576940, 16 bytes long.
 Data: < sW_&#156;           > 18 73 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000029C5F576300, 16 bytes long.
 Data: <&#240;rW_&#156;           > F0 72 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000029C5F5759A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x0000029C5F576E90, 16 bytes long.
 Data: <X V_&#156;           > 58 98 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000029C5F570250, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x0000029C5F576E40, 16 bytes long.
 Data: <0 V_&#156;           > 30 98 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000029C5F576710, 16 bytes long.
 Data: <  V_&#156;           > 08 98 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000029C5F576DF0, 16 bytes long.
 Data: <&#224;&#151;V_&#156;           > E0 97 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000029C5F576530, 16 bytes long.
 Data: <&#184;&#151;V_&#156;           > B8 97 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000029C5F5763F0, 16 bytes long.
 Data: < &#151;V_&#156;           > 90 97 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000029C5F5767B0, 16 bytes long.
 Data: <h&#151;V_&#156;           > 68 97 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000029C5F570130, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x0000029C5F576DA0, 16 bytes long.
 Data: <@&#151;V_&#156;           > 40 97 56 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000029C5F569740, 320 bytes long.
 Data: <&#160;mW_&#156;   0 W_&#156;   > A0 6D 57 5F 9C 02 00 00 30 01 57 5F 9C 02 00 00 
{277} normal block at 0x0000029C5F576D50, 16 bytes long.
 Data: <&#208;rW_&#156;           > D0 72 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000029C5F576FD0, 16 bytes long.
 Data: <&#168;rW_&#156;           > A8 72 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000029C5F56FB30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x0000029C5F576440, 16 bytes long.
 Data: < rW_&#156;           > 80 72 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000029C5F56FAD0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x0000029C5F576350, 16 bytes long.
 Data: <&#200;qW_&#156;           > C8 71 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000029C5F576D00, 16 bytes long.
 Data: <&#160;qW_&#156;           > A0 71 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000029C5F576B70, 16 bytes long.
 Data: <xqW_&#156;           > 78 71 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000029C5F5768F0, 16 bytes long.
 Data: <PqW_&#156;           > 50 71 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000029C5F576BC0, 16 bytes long.
 Data: <(qW_&#156;           > 28 71 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000029C5F5762B0, 16 bytes long.
 Data: < qW_&#156;           > 00 71 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000029C5F576C60, 16 bytes long.
 Data: <&#192;XW_&#156;           > C0 58 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000029C5F5758C0, 40 bytes long.
 Data: <`lW_&#156;    [ a&#156;   > 60 6C 57 5F 9C 02 00 00 90 5B 14 61 9C 02 00 00 
{263} normal block at 0x0000029C5F576F80, 16 bytes long.
 Data: <&#224;pW_&#156;           > E0 70 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000029C5F576EE0, 16 bytes long.
 Data: <&#184;pW_&#156;           > B8 70 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000029C5F56FE90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x0000029C5F576CB0, 16 bytes long.
 Data: < pW_&#156;           > 90 70 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000029C5F577090, 992 bytes long.
 Data: <&#176;lW_&#156;    &#254;V_&#156;   > B0 6C 57 5F 9C 02 00 00 90 FE 56 5F 9C 02 00 00 
{95} normal block at 0x0000029C5F570790, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x0000029C5F56DD20, 16 bytes long.
 Data: <P_W_&#156;           > 50 5F 57 5F 9C 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x0000029C5F575F50, 40 bytes long.
 Data: < &#221;V_&#156;     W_&#156;   > 20 DD 56 5F 9C 02 00 00 90 07 57 5F 9C 02 00 00 
{72} normal block at 0x0000029C5F56DBE0, 16 bytes long.
 Data: < &#234; p&#247;           > 80 EA 20 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000029C5F56DC80, 16 bytes long.
 Data: <@&#233; p&#247;           > 40 E9 20 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000029C5F56DB90, 16 bytes long.
 Data: <&#248;W p&#247;           > F8 57 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000029C5F56E1D0, 16 bytes long.
 Data: <&#216;W p&#247;           > D8 57 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000029C5F56DFF0, 16 bytes long.
 Data: <P  p&#247;           > 50 04 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000029C5F56E180, 16 bytes long.
 Data: <0  p&#247;           > 30 04 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000029C5F56E720, 16 bytes long.
 Data: <&#224;  p&#247;           > E0 02 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000029C5F56E4A0, 16 bytes long.
 Data: <   p&#247;           > 10 04 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000029C5F56E6D0, 16 bytes long.
 Data: <p  p&#247;           > 70 04 1D 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000029C5F56E450, 16 bytes long.
 Data: < &#192; p&#247;           > 18 C0 1B 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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