Task 38684774

Name test_926-GPUGRID_TEST_ATM_40STEP_20261023-32-40-RND8590_0
Workunit 31626278
Created 27 Oct 2026, 17:55:07 UTC
Sent 27 Oct 2026, 17:55:10 UTC
Report deadline 1 Nov 2026, 17:55:10 UTC
Received 27 Oct 2026, 18:37:00 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 640732
Run time 21 min 55 sec
CPU time 19 min 34 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 109,325.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 747.54 MB
Peak swap size 13.25 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
18:09:59 (26600): wrapper (7.9.26016): starting
18:09:59 (26600): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
18:10:01 (26600): Library/usr/bin/tar.exe exited; CPU time 0.015625
18:10:01 (26600): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\61\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\61\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:35:10 (26600): C:/Windows/system32/cmd.exe exited; CPU time 1174.500000
18:35:10 (26600): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27508121 bytes.
Dumping objects ->
{3835192} normal block at 0x000001C9FB05CC00, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835181} normal block at 0x000001C9FB05D060, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835170} normal block at 0x000001C9FB05C960, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835159} normal block at 0x000001C9F93D47F0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835148} normal block at 0x000001C9F93D4780, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835117} normal block at 0x000001C9FB0A5850, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835104} normal block at 0x000001C9F93D05D0, 8 bytes long.
 Data: <  9&#249;&#201;   > 00 00 39 F9 C9 01 00 00 
{3833961} normal block at 0x000001C9F93CFA40, 8 bytes long.
 Data: <0D &#251;&#201;   > 30 44 10 FB C9 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001C9F93C65D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001C9F93C71C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001C9F93D5BC0, 16 bytes long.
 Data: < e=&#249;&#201;           > 98 65 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001C9F93D5EE0, 16 bytes long.
 Data: <pe=&#249;&#201;           > 70 65 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001C9F93D1020, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001C9F93D5850, 16 bytes long.
 Data: <He=&#249;&#201;           > 48 65 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001C9F93D5AD0, 16 bytes long.
 Data: < e=&#249;&#201;           > 20 65 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001C9F93D5580, 16 bytes long.
 Data: <&#248;d=&#249;&#201;           > F8 64 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001C9F93D5A30, 16 bytes long.
 Data: <&#208;d=&#249;&#201;           > D0 64 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001C9F93D4860, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001C9F93D5530, 16 bytes long.
 Data: < &#249;;&#249;&#201;           > 88 F9 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001C9F93D11A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001C9F93D5490, 16 bytes long.
 Data: <`&#249;;&#249;&#201;           > 60 F9 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001C9F93D53A0, 16 bytes long.
 Data: <8&#249;;&#249;&#201;           > 38 F9 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001C9F93D5D00, 16 bytes long.
 Data: < &#249;;&#249;&#201;           > 10 F9 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001C9F93D52B0, 16 bytes long.
 Data: <&#232;&#248;;&#249;&#201;           > E8 F8 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001C9F93D54E0, 16 bytes long.
 Data: <&#192;&#248;;&#249;&#201;           > C0 F8 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001C9F93D6110, 16 bytes long.
 Data: < &#248;;&#249;&#201;           > 98 F8 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001C9F93D10E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001C9F93D5CB0, 16 bytes long.
 Data: <p&#248;;&#249;&#201;           > 70 F8 3B F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001C9F93BF870, 320 bytes long.
 Data: <&#176;\=&#249;&#201;   &#224; =&#249;&#201;   > B0 5C 3D F9 C9 01 00 00 E0 10 3D F9 C9 01 00 00 
{276} normal block at 0x000001C9F93D59E0, 16 bytes long.
 Data: <&#176;d=&#249;&#201;           > B0 64 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001C9F93D60C0, 16 bytes long.
 Data: < d=&#249;&#201;           > 88 64 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001C9F93D0FC0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001C9F93D56C0, 16 bytes long.
 Data: <`d=&#249;&#201;           > 60 64 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001C9F93D0AE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001C9F93D5440, 16 bytes long.
 Data: <&#168;c=&#249;&#201;           > A8 63 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001C9F93D53F0, 16 bytes long.
 Data: < c=&#249;&#201;           > 80 63 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001C9F93D6070, 16 bytes long.
 Data: <Xc=&#249;&#201;           > 58 63 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001C9F93D6160, 16 bytes long.
 Data: <0c=&#249;&#201;           > 30 63 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001C9F93D58A0, 16 bytes long.
 Data: < c=&#249;&#201;           > 08 63 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001C9F93D5E90, 16 bytes long.
 Data: <&#224;b=&#249;&#201;           > E0 62 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001C9F93D6020, 16 bytes long.
 Data: <@I=&#249;&#201;           > 40 49 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001C9F93D4940, 40 bytes long.
 Data: < `=&#249;&#201;   PX &#251;&#201;   > 20 60 3D F9 C9 01 00 00 50 58 0A FB C9 01 00 00 
{262} normal block at 0x000001C9F93D5FD0, 16 bytes long.
 Data: <&#192;b=&#249;&#201;           > C0 62 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001C9F93D5F80, 16 bytes long.
 Data: < b=&#249;&#201;           > 98 62 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001C9F93D0DE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001C9F93D5990, 16 bytes long.
 Data: <pb=&#249;&#201;           > 70 62 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001C9F93D6270, 992 bytes long.
 Data: < Y=&#249;&#201;   &#224; =&#249;&#201;   > 90 59 3D F9 C9 01 00 00 E0 0D 3D F9 C9 01 00 00 
{94} normal block at 0x000001C9F93D07E0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001C9F93D0580, 16 bytes long.
 Data: <0M=&#249;&#201;           > 30 4D 3D F9 C9 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001C9F93D4D30, 40 bytes long.
 Data: <  =&#249;&#201;   &#224; =&#249;&#201;   > 80 05 3D F9 C9 01 00 00 E0 07 3D F9 C9 01 00 00 
{71} normal block at 0x000001C9F93CF9F0, 16 bytes long.
 Data: < &#234;>&#229;&#246;           > 80 EA 3E E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001C9F93D0530, 16 bytes long.
 Data: <@&#233;>&#229;&#246;           > 40 E9 3E E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001C9F93D0210, 16 bytes long.
 Data: <&#248;W;&#229;&#246;           > F8 57 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001C9F93D01C0, 16 bytes long.
 Data: <&#216;W;&#229;&#246;           > D8 57 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001C9F93CFEA0, 16 bytes long.
 Data: <P ;&#229;&#246;           > 50 04 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001C9F93D04E0, 16 bytes long.
 Data: <0 ;&#229;&#246;           > 30 04 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001C9F93D0030, 16 bytes long.
 Data: <&#224; ;&#229;&#246;           > E0 02 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001C9F93CFBD0, 16 bytes long.
 Data: <  ;&#229;&#246;           > 10 04 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001C9F93CFA90, 16 bytes long.
 Data: <p ;&#229;&#246;           > 70 04 3B E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001C9F93CF900, 16 bytes long.
 Data: < &#192;9&#229;&#246;           > 18 C0 39 E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra