Task 38684699

Name test_34-GPUGRID_TEST_ATM_40STEP_20261023-24-40-RND9539_0
Workunit 31626206
Created 27 Oct 2026, 17:35:47 UTC
Sent 27 Oct 2026, 17:35:49 UTC
Report deadline 1 Nov 2026, 17:35:49 UTC
Received 27 Oct 2026, 18:57:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 617005
Run time 58 min
CPU time 49 min 24 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 9,204.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 663.84 MB
Peak swap size 2.25 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
20:56:10 (12436): wrapper (7.9.26016): starting
20:56:10 (12436): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
20:56:16 (12436): Library/usr/bin/tar.exe exited; CPU time 0.015625
20:56:16 (12436): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:52:20 (12436): C:/Windows/system32/cmd.exe exited; CPU time 2964.687500
21:52:20 (12436): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
2288 bytes in 2 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 52811865 bytes.
Dumping objects ->
{3835529} normal block at 0x000002D4C2391430, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835518} normal block at 0x000002D4C3FC4930, 32 bytes long.
 Data: <HOME=D:\BOINC\sl> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835507} normal block at 0x000002D4C3FC4B70, 32 bytes long.
 Data: <TMP=D:\BOINC\slo> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835496} normal block at 0x000002D4C3FC4510, 32 bytes long.
 Data: <TEMP=D:\BOINC\sl> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835485} normal block at 0x000002D4C3FC5710, 32 bytes long.
 Data: <TMPDIR=D:\BOINC\> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 5C 
{3835454} normal block at 0x000002D4C2391270, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835443} normal block at 0x000002D4C2388990, 200 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835440} normal block at 0x000002D4C2386A00, 8 bytes long.
 Data: <  &#209;&#195;&#212;   > 00 00 D1 C3 D4 02 00 00 
{3834685} normal block at 0x000002D4C238A0F0, 200 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833943} normal block at 0x000002D4C2386F00, 8 bytes long.
 Data: < q&#248;&#195;&#212;   > 10 71 F8 C3 D4 02 00 00 
..\zip\boinc_zip.cpp(122) : {303} normal block at 0x000002D4C2391E80, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002D4C2375F20, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{287} normal block at 0x000002D4C2393550, 16 bytes long.
 Data: <x?9&#194;&#212;           > 78 3F 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002D4C2393820, 16 bytes long.
 Data: <P?9&#194;&#212;           > 50 3F 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002D4C238C380, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{284} normal block at 0x000002D4C2393140, 16 bytes long.
 Data: <(?9&#194;&#212;           > 28 3F 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002D4C2392C90, 16 bytes long.
 Data: < ?9&#194;&#212;           > 00 3F 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002D4C2393BE0, 16 bytes long.
 Data: <&#216;>9&#194;&#212;           > D8 3E 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002D4C2392EC0, 16 bytes long.
 Data: <&#176;>9&#194;&#212;           > B0 3E 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002D4C2391740, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{279} normal block at 0x000002D4C2393A00, 16 bytes long.
 Data: <&#184;^7&#194;&#212;           > B8 5E 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002D4C238B8A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{277} normal block at 0x000002D4C2392E70, 16 bytes long.
 Data: <&#144;^7&#194;&#212;           > 90 5E 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002D4C2392E20, 16 bytes long.
 Data: <h^7&#194;&#212;           > 68 5E 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002D4C23933C0, 16 bytes long.
 Data: <@^7&#194;&#212;           > 40 5E 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002D4C2393500, 16 bytes long.
 Data: < ^7&#194;&#212;           > 18 5E 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002D4C2393410, 16 bytes long.
 Data: <&#240;]7&#194;&#212;           > F0 5D 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002D4C23937D0, 16 bytes long.
 Data: <&#200;]7&#194;&#212;           > C8 5D 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002D4C238B780, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{269} normal block at 0x000002D4C23930F0, 16 bytes long.
 Data: <&#160;]7&#194;&#212;           > A0 5D 37 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002D4C2375DA0, 320 bytes long.
 Data: <&#240;09&#194;&#212;   &#128;&#183;8&#194;&#212;   > F0 30 39 C2 D4 02 00 00 80 B7 38 C2 D4 02 00 00 
{267} normal block at 0x000002D4C2392D80, 16 bytes long.
 Data: <&#144;>9&#194;&#212;           > 90 3E 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002D4C2393730, 16 bytes long.
 Data: <h>9&#194;&#212;           > 68 3E 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002D4C238BD80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{264} normal block at 0x000002D4C23930A0, 16 bytes long.
 Data: <@>9&#194;&#212;           > 40 3E 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002D4C238C5C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{262} normal block at 0x000002D4C2393640, 16 bytes long.
 Data: < =9&#194;&#212;           > 88 3D 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002D4C23936E0, 16 bytes long.
 Data: <`=9&#194;&#212;           > 60 3D 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002D4C2393000, 16 bytes long.
 Data: <8=9&#194;&#212;           > 38 3D 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002D4C2393050, 16 bytes long.
 Data: < =9&#194;&#212;           > 10 3D 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002D4C2392DD0, 16 bytes long.
 Data: <&#232;<9&#194;&#212;           > E8 3C 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002D4C2393780, 16 bytes long.
 Data: <&#192;<9&#194;&#212;           > C0 3C 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002D4C2393370, 16 bytes long.
 Data: <&#160; 9&#194;&#212;           > A0 14 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000002D4C23914A0, 40 bytes long.
 Data: <p39&#194;&#212;   p 9&#194;&#212;   > 70 33 39 C2 D4 02 00 00 70 12 39 C2 D4 02 00 00 
{253} normal block at 0x000002D4C2392D30, 16 bytes long.
 Data: <&#160;<9&#194;&#212;           > A0 3C 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002D4C23939B0, 16 bytes long.
 Data: <x<9&#194;&#212;           > 78 3C 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000002D4C238C080, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{250} normal block at 0x000002D4C2393230, 16 bytes long.
 Data: <P<9&#194;&#212;           > 50 3C 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{249} normal block at 0x000002D4C2393C50, 992 bytes long.
 Data: <029&#194;&#212;   &#128;&#192;8&#194;&#212;   > 30 32 39 C2 D4 02 00 00 80 C0 38 C2 D4 02 00 00 
{85} normal block at 0x000002D4C238BFC0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{84} normal block at 0x000002D4C2386E60, 16 bytes long.
 Data: <  9&#194;&#212;           > 00 12 39 C2 D4 02 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x000002D4C2391200, 40 bytes long.
 Data: <`n8&#194;&#212;   &#192;&#191;8&#194;&#212;   > 60 6E 38 C2 D4 02 00 00 C0 BF 38 C2 D4 02 00 00 
{62} normal block at 0x000002D4C23876D0, 16 bytes long.
 Data: <&#128;&#234;&#241;&#226;&#246;           > 80 EA F1 E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002D4C2387360, 16 bytes long.
 Data: <@&#233;&#241;&#226;&#246;           > 40 E9 F1 E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002D4C2386C30, 16 bytes long.
 Data: <&#248;W&#238;&#226;&#246;           > F8 57 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002D4C2386E10, 16 bytes long.
 Data: <&#216;W&#238;&#226;&#246;           > D8 57 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002D4C2387680, 16 bytes long.
 Data: <P &#238;&#226;&#246;           > 50 04 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002D4C2387310, 16 bytes long.
 Data: <0 &#238;&#226;&#246;           > 30 04 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002D4C2386960, 16 bytes long.
 Data: <&#224; &#238;&#226;&#246;           > E0 02 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002D4C2386DC0, 16 bytes long.
 Data: <  &#238;&#226;&#246;           > 10 04 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002D4C2386910, 16 bytes long.
 Data: <p &#238;&#226;&#246;           > 70 04 EE E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000002D4C23874A0, 16 bytes long.
 Data: < &#192;&#236;&#226;&#246;           > 18 C0 EC E2 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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