Task 38684387

Name test_563-GPUGRID_TEST_ATM_40STEP_20261023-34-40-RND8357_0
Workunit 31625902
Created 27 Oct 2026, 16:04:47 UTC
Sent 27 Oct 2026, 16:04:52 UTC
Report deadline 1 Nov 2026, 16:04:52 UTC
Received 27 Oct 2026, 17:27:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 632099
Run time 27 min 27 sec
CPU time 27 min 21 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 30,032.43 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 730.99 MB
Peak swap size 12.96 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:59:45 (13868): wrapper (7.9.26016): starting
17:59:45 (13868): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:59:46 (13868): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:59:46 (13868): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:26:26 (13868): C:/Windows/system32/cmd.exe exited; CPU time 1641.046875
18:26:26 (13868): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 22667323 bytes.
Dumping objects ->
{3835270} normal block at 0x00000230B4286510, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835259} normal block at 0x00000230B4285B00, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835248} normal block at 0x00000230B4285D30, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835237} normal block at 0x00000230B42863C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835226} normal block at 0x00000230B42858D0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835195} normal block at 0x00000230B5E2BA80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835184} normal block at 0x00000230B5ED23F0, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835181} normal block at 0x00000230B4256C40, 8 bytes long.
 Data: <   &#180;0   > 00 00 1F B4 30 02 00 00 
{3834569} normal block at 0x00000230B5ED2770, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x00000230B4256510, 8 bytes long.
 Data: < &#220;3&#180;0   > 80 DC 33 B4 30 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x00000230B4260FF0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000230B4245D80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x00000230B4262940, 16 bytes long.
 Data: <(6&&#180;0           > 28 36 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000230B4262990, 16 bytes long.
 Data: < 6&&#180;0           > 00 36 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000230B425CBC0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x00000230B4262DF0, 16 bytes long.
 Data: <&#216;5&&#180;0           > D8 35 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000230B42622B0, 16 bytes long.
 Data: <&#176;5&&#180;0           > B0 35 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000230B4262350, 16 bytes long.
 Data: < 5&&#180;0           > 88 35 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000230B4262260, 16 bytes long.
 Data: <`5&&#180;0           > 60 35 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000230B425EBA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x00000230B4262E90, 16 bytes long.
 Data: < ]$&#180;0           > 18 5D 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000230B425CC20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x00000230B4262B20, 16 bytes long.
 Data: <&#240;\$&#180;0           > F0 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000230B4262530, 16 bytes long.
 Data: <&#200;\$&#180;0           > C8 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000230B42624E0, 16 bytes long.
 Data: <&#160;\$&#180;0           > A0 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000230B42628A0, 16 bytes long.
 Data: <x\$&#180;0           > 78 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000230B4262580, 16 bytes long.
 Data: <P\$&#180;0           > 50 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000230B4261F90, 16 bytes long.
 Data: <(\$&#180;0           > 28 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000230B425D700, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x00000230B4262120, 16 bytes long.
 Data: < \$&#180;0           > 00 5C 24 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000230B4245C00, 320 bytes long.
 Data: < !&&#180;0    &#215;%&#180;0   > 20 21 26 B4 30 02 00 00 00 D7 25 B4 30 02 00 00 
{274} normal block at 0x00000230B4262300, 16 bytes long.
 Data: <@5&&#180;0           > 40 35 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000230B4262490, 16 bytes long.
 Data: < 5&&#180;0           > 18 35 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000230B425C980, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x00000230B4262760, 16 bytes long.
 Data: <&#240;4&&#180;0           > F0 34 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000230B425CAA0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x00000230B4262440, 16 bytes long.
 Data: <84&&#180;0           > 38 34 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000230B42626C0, 16 bytes long.
 Data: < 4&&#180;0           > 10 34 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000230B42627B0, 16 bytes long.
 Data: <&#232;3&&#180;0           > E8 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000230B4262210, 16 bytes long.
 Data: <&#192;3&&#180;0           > C0 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000230B4262B70, 16 bytes long.
 Data: < 3&&#180;0           > 98 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000230B4262A30, 16 bytes long.
 Data: <p3&&#180;0           > 70 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000230B4262A80, 16 bytes long.
 Data: < &#236;%&#180;0           > 10 EC 25 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000230B425EC10, 40 bytes long.
 Data: < *&&#180;0    &#186;&#226;&#181;0   > 80 2A 26 B4 30 02 00 00 80 BA E2 B5 30 02 00 00 
{260} normal block at 0x00000230B4262DA0, 16 bytes long.
 Data: <P3&&#180;0           > 50 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000230B4262D50, 16 bytes long.
 Data: <(3&&#180;0           > 28 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000230B425D1C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x00000230B42623F0, 16 bytes long.
 Data: < 3&&#180;0           > 00 33 26 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000230B4263300, 992 bytes long.
 Data: <&#240;#&&#180;0   &#192;&#209;%&#180;0   > F0 23 26 B4 30 02 00 00 C0 D1 25 B4 30 02 00 00 
{92} normal block at 0x00000230B425C800, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x00000230B42571E0, 16 bytes long.
 Data: <0&#235;%&#180;0           > 30 EB 25 B4 30 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x00000230B425EB30, 40 bytes long.
 Data: <&#224;q%&#180;0    &#200;%&#180;0   > E0 71 25 B4 30 02 00 00 00 C8 25 B4 30 02 00 00 
{69} normal block at 0x00000230B4257140, 16 bytes long.
 Data: < &#234;&#171;&#191;&#246;           > 80 EA AB BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000230B4256E70, 16 bytes long.
 Data: <@&#233;&#171;&#191;&#246;           > 40 E9 AB BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000230B4256BA0, 16 bytes long.
 Data: <&#248;W&#168;&#191;&#246;           > F8 57 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000230B4256600, 16 bytes long.
 Data: <&#216;W&#168;&#191;&#246;           > D8 57 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000230B4256D80, 16 bytes long.
 Data: <P &#168;&#191;&#246;           > 50 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000230B42564C0, 16 bytes long.
 Data: <0 &#168;&#191;&#246;           > 30 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000230B4256B00, 16 bytes long.
 Data: <&#224; &#168;&#191;&#246;           > E0 02 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000230B4256790, 16 bytes long.
 Data: <  &#168;&#191;&#246;           > 10 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000230B4257050, 16 bytes long.
 Data: <p &#168;&#191;&#246;           > 70 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000230B4257320, 16 bytes long.
 Data: < &#192;&#166;&#191;&#246;           > 18 C0 A6 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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