Task 38684343

Name test_878-GPUGRID_TEST_ATM_40STEP_20261023-15-40-RND4542_0
Workunit 31625858
Created 27 Oct 2026, 15:55:36 UTC
Sent 27 Oct 2026, 15:55:36 UTC
Report deadline 1 Nov 2026, 15:55:36 UTC
Received 27 Oct 2026, 16:17:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 627872
Run time 21 min 13 sec
CPU time 19 min 35 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 45,115.95 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 709.83 MB
Peak swap size 6.96 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
16:56:29 (53640): wrapper (7.9.26016): starting
16:56:29 (53640): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:56:30 (53640): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:56:30 (53640): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:16:55 (53640): C:/Windows/system32/cmd.exe exited; CPU time 1175.359375
17:16:55 (53640): called boinc_finish(0)
0 bytes in 0 Free Blocks.
616 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27625687 bytes.
Dumping objects ->
{3835263} normal block at 0x00000283B847B690, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835252} normal block at 0x00000283B847B380, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835241} normal block at 0x00000283B847B4D0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835230} normal block at 0x00000283B6782CE0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835219} normal block at 0x00000283B6782C00, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835188} normal block at 0x00000283B841BB80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835177} normal block at 0x00000283B67A9960, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835174} normal block at 0x00000283B677E7A0, 8 bytes long.
 Data: <  &#196;&#182;    > 00 00 C4 B6 83 02 00 00 
{3834566} normal block at 0x00000283B67A9B40, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x00000283B677E750, 8 bytes long.
 Data: <0&#159;G&#184;    > 30 9F 47 B8 83 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000283B6776970, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000283B67771C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000283B6783620, 16 bytes long.
 Data: < Jx&#182;            > 88 4A 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000283B67835D0, 16 bytes long.
 Data: <`Jx&#182;            > 60 4A 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000283B677F5D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000283B6783580, 16 bytes long.
 Data: <8Jx&#182;            > 38 4A 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000283B6783E40, 16 bytes long.
 Data: < Jx&#182;            > 10 4A 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000283B6783DF0, 16 bytes long.
 Data: <&#232;Ix&#182;            > E8 49 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000283B6783530, 16 bytes long.
 Data: <&#192;Ix&#182;            > C0 49 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000283B6782DC0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000283B6783DA0, 16 bytes long.
 Data: < &#164;w&#182;            > 18 A4 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000283B677F7B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000283B6783D50, 16 bytes long.
 Data: <&#240;&#163;w&#182;            > F0 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000283B67834E0, 16 bytes long.
 Data: <&#200;&#163;w&#182;            > C8 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000283B6783990, 16 bytes long.
 Data: <&#160;&#163;w&#182;            > A0 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000283B67833F0, 16 bytes long.
 Data: <x&#163;w&#182;            > 78 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000283B6784110, 16 bytes long.
 Data: <P&#163;w&#182;            > 50 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000283B6784020, 16 bytes long.
 Data: <(&#163;w&#182;            > 28 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000283B677F030, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000283B6783C10, 16 bytes long.
 Data: < &#163;w&#182;            > 00 A3 77 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000283B677A300, 320 bytes long.
 Data: < <x&#182;    0&#240;w&#182;    > 10 3C 78 B6 83 02 00 00 30 F0 77 B6 83 02 00 00 
{277} normal block at 0x00000283B6784070, 16 bytes long.
 Data: <&#160;Ix&#182;            > A0 49 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000283B6783490, 16 bytes long.
 Data: <xIx&#182;            > 78 49 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000283B677ED30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000283B67842F0, 16 bytes long.
 Data: <PIx&#182;            > 50 49 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000283B677EF70, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000283B6784200, 16 bytes long.
 Data: < Hx&#182;            > 98 48 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000283B6784160, 16 bytes long.
 Data: <pHx&#182;            > 70 48 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000283B6783940, 16 bytes long.
 Data: <HHx&#182;            > 48 48 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000283B6783F80, 16 bytes long.
 Data: < Hx&#182;            > 20 48 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000283B67842A0, 16 bytes long.
 Data: <&#248;Gx&#182;            > F8 47 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000283B6783440, 16 bytes long.
 Data: <&#208;Gx&#182;            > D0 47 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000283B67841B0, 16 bytes long.
 Data: <&#160;.x&#182;            > A0 2E 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000283B6782EA0, 40 bytes long.
 Data: <&#176;Ax&#182;     &#187;A&#184;    > B0 41 78 B6 83 02 00 00 80 BB 41 B8 83 02 00 00 
{263} normal block at 0x00000283B67833A0, 16 bytes long.
 Data: <&#176;Gx&#182;            > B0 47 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000283B67840C0, 16 bytes long.
 Data: < Gx&#182;            > 88 47 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000283B677F810, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000283B6783C60, 16 bytes long.
 Data: <`Gx&#182;            > 60 47 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000283B6784760, 992 bytes long.
 Data: <`<x&#182;     &#248;w&#182;    > 60 3C 78 B6 83 02 00 00 10 F8 77 B6 83 02 00 00 
{95} normal block at 0x00000283B677EEB0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000283B677E2F0, 16 bytes long.
 Data: <P-x&#182;            > 50 2D 78 B6 83 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000283B6782D50, 40 bytes long.
 Data: <&#240;&#226;w&#182;    &#176;&#238;w&#182;    > F0 E2 77 B6 83 02 00 00 B0 EE 77 B6 83 02 00 00 
{72} normal block at 0x00000283B677E6B0, 16 bytes long.
 Data: < &#234;&#200;&#210;&#247;           > 80 EA C8 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000283B677E1B0, 16 bytes long.
 Data: <@&#233;&#200;&#210;&#247;           > 40 E9 C8 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000283B677DDA0, 16 bytes long.
 Data: <&#248;W&#197;&#210;&#247;           > F8 57 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000283B677E070, 16 bytes long.
 Data: <&#216;W&#197;&#210;&#247;           > D8 57 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000283B677E5C0, 16 bytes long.
 Data: <P &#197;&#210;&#247;           > 50 04 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000283B677E930, 16 bytes long.
 Data: <0 &#197;&#210;&#247;           > 30 04 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000283B677E0C0, 16 bytes long.
 Data: <&#224; &#197;&#210;&#247;           > E0 02 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000283B677E250, 16 bytes long.
 Data: <  &#197;&#210;&#247;           > 10 04 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000283B677E570, 16 bytes long.
 Data: <p &#197;&#210;&#247;           > 70 04 C5 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000283B677E8E0, 16 bytes long.
 Data: < &#192;&#195;&#210;&#247;           > 18 C0 C3 D2 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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