Task 38684195

Name test_563-GPUGRID_TEST_ATM_40STEP_20261023-33-40-RND8357_0
Workunit 31625716
Created 27 Oct 2026, 15:08:44 UTC
Sent 27 Oct 2026, 15:08:51 UTC
Report deadline 1 Nov 2026, 15:08:51 UTC
Received 27 Oct 2026, 16:04:35 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 632099
Run time 26 min 20 sec
CPU time 25 min 59 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 30,032.43 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 732.77 MB
Peak swap size 12.96 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
16:38:25 (3324): wrapper (7.9.26016): starting
16:38:25 (3324): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:38:26 (3324): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:38:26 (3324): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:03:53 (3324): C:/Windows/system32/cmd.exe exited; CPU time 1559.453125
17:03:53 (3324): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 20693065 bytes.
Dumping objects ->
{3835270} normal block at 0x000001DC8FA462C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835259} normal block at 0x000001DC8FA457D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835248} normal block at 0x000001DC8FA46410, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835237} normal block at 0x000001DC8FA46560, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835226} normal block at 0x000001DC8FA45D80, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835195} normal block at 0x000001DC916DC700, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835184} normal block at 0x000001DC91661C30, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835181} normal block at 0x000001DC8FA173A0, 8 bytes long.
 Data: <  G&#145;&#220;   > 00 00 47 91 DC 01 00 00 
{3834569} normal block at 0x000001DC91661DF0, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001DC8FA16950, 8 bytes long.
 Data: < &#198;&#167; &#220;   > 00 C6 A7 8F DC 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001DC8FA20FD0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001DC8FA05D80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001DC8FA226F0, 16 bytes long.
 Data: < 6&#162; &#220;           > 08 36 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001DC8FA22C90, 16 bytes long.
 Data: <&#224;5&#162; &#220;           > E0 35 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001DC8FA1D680, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001DC8FA226A0, 16 bytes long.
 Data: <&#184;5&#162; &#220;           > B8 35 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001DC8FA228D0, 16 bytes long.
 Data: < 5&#162; &#220;           > 90 35 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001DC8FA22880, 16 bytes long.
 Data: <h5&#162; &#220;           > 68 35 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001DC8FA22600, 16 bytes long.
 Data: <@5&#162; &#220;           > 40 35 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001DC8FA1EF00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001DC8FA225B0, 16 bytes long.
 Data: < ]&#160; &#220;           > 18 5D A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001DC8FA1D2C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001DC8FA22D80, 16 bytes long.
 Data: <&#240;\&#160; &#220;           > F0 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001DC8FA22E20, 16 bytes long.
 Data: <&#200;\&#160; &#220;           > C8 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001DC8FA22BF0, 16 bytes long.
 Data: <&#160;\&#160; &#220;           > A0 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001DC8FA22560, 16 bytes long.
 Data: <x\&#160; &#220;           > 78 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001DC8FA227E0, 16 bytes long.
 Data: <P\&#160; &#220;           > 50 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001DC8FA22830, 16 bytes long.
 Data: <(\&#160; &#220;           > 28 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001DC8FA1CAE0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001DC8FA22D30, 16 bytes long.
 Data: < \&#160; &#220;           > 00 5C A0 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001DC8FA05C00, 320 bytes long.
 Data: <0-&#162; &#220;   &#224;&#202;&#161; &#220;   > 30 2D A2 8F DC 01 00 00 E0 CA A1 8F DC 01 00 00 
{274} normal block at 0x000001DC8FA224C0, 16 bytes long.
 Data: < 5&#162; &#220;           > 20 35 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001DC8FA22B50, 16 bytes long.
 Data: <&#248;4&#162; &#220;           > F8 34 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001DC8FA1D1A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001DC8FA221F0, 16 bytes long.
 Data: <&#208;4&#162; &#220;           > D0 34 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001DC8FA1CD80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001DC8FA22C40, 16 bytes long.
 Data: < 4&#162; &#220;           > 18 34 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001DC8FA22510, 16 bytes long.
 Data: <&#240;3&#162; &#220;           > F0 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001DC8FA22470, 16 bytes long.
 Data: <&#200;3&#162; &#220;           > C8 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001DC8FA22A10, 16 bytes long.
 Data: <&#160;3&#162; &#220;           > A0 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001DC8FA223D0, 16 bytes long.
 Data: <x3&#162; &#220;           > 78 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001DC8FA22380, 16 bytes long.
 Data: <P3&#162; &#220;           > 50 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001DC8FA22150, 16 bytes long.
 Data: <&#240;&#235;&#161; &#220;           > F0 EB A1 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001DC8FA1EBF0, 40 bytes long.
 Data: <P!&#162; &#220;    &#199;m&#145;&#220;   > 50 21 A2 8F DC 01 00 00 00 C7 6D 91 DC 01 00 00 
{260} normal block at 0x000001DC8FA22BA0, 16 bytes long.
 Data: <03&#162; &#220;           > 30 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001DC8FA21FC0, 16 bytes long.
 Data: < 3&#162; &#220;           > 08 33 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001DC8FA1CA20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001DC8FA222E0, 16 bytes long.
 Data: <&#224;2&#162; &#220;           > E0 32 A2 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001DC8FA232E0, 992 bytes long.
 Data: <&#224;"&#162; &#220;    &#202;&#161; &#220;   > E0 22 A2 8F DC 01 00 00 20 CA A1 8F DC 01 00 00 
{92} normal block at 0x000001DC8FA1D5C0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001DC8FA170D0, 16 bytes long.
 Data: < &#238;&#161; &#220;           > 90 EE A1 8F DC 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001DC8FA1EE90, 40 bytes long.
 Data: <&#208;p&#161; &#220;   &#192;&#213;&#161; &#220;   > D0 70 A1 8F DC 01 00 00 C0 D5 A1 8F DC 01 00 00 
{69} normal block at 0x000001DC8FA16770, 16 bytes long.
 Data: < &#234;&#171;&#191;&#246;           > 80 EA AB BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001DC8FA17210, 16 bytes long.
 Data: <@&#233;&#171;&#191;&#246;           > 40 E9 AB BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001DC8FA16EF0, 16 bytes long.
 Data: <&#248;W&#168;&#191;&#246;           > F8 57 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001DC8FA16A40, 16 bytes long.
 Data: <&#216;W&#168;&#191;&#246;           > D8 57 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001DC8FA16DB0, 16 bytes long.
 Data: <P &#168;&#191;&#246;           > 50 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001DC8FA171C0, 16 bytes long.
 Data: <0 &#168;&#191;&#246;           > 30 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001DC8FA17120, 16 bytes long.
 Data: <&#224; &#168;&#191;&#246;           > E0 02 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001DC8FA16540, 16 bytes long.
 Data: <  &#168;&#191;&#246;           > 10 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001DC8FA16BD0, 16 bytes long.
 Data: <p &#168;&#191;&#246;           > 70 04 A8 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001DC8FA168B0, 16 bytes long.
 Data: < &#192;&#166;&#191;&#246;           > 18 C0 A6 BF F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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