Task 38683868

Name test_687-GPUGRID_TEST_ATM_40STEP_20261023-26-40-RND7624_0
Workunit 31625407
Created 27 Oct 2026, 13:41:02 UTC
Sent 27 Oct 2026, 13:41:10 UTC
Report deadline 1 Nov 2026, 13:41:10 UTC
Received 27 Oct 2026, 13:53:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654520
Run time 11 min 50 sec
CPU time 11 min 6 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 107,364.84 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 754.39 MB
Peak swap size 13.24 GB
Peak disk usage 4.05 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:42:09 (28436): wrapper (7.9.26016): starting
21:42:09 (28436): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:42:10 (28436): Library/usr/bin/tar.exe exited; CPU time 0.015625
21:42:10 (28436): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:53:27 (28436): C:/Windows/system32/cmd.exe exited; CPU time 666.796875
21:53:27 (28436): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 10684361 bytes.
Dumping objects ->
{3835687} normal block at 0x000001E654069580, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835676} normal block at 0x000001E654069820, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835665} normal block at 0x000001E654068E80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835654} normal block at 0x000001E654069040, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835643} normal block at 0x000001E654068F60, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835612} normal block at 0x000001E656167BA0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835599} normal block at 0x000001E65403D740, 8 bytes long.
 Data: <  UT    > 00 00 55 54 E6 01 00 00 
{3834089} normal block at 0x000001E65403DCE0, 8 bytes long.
 Data: < P T    > 20 50 04 54 E6 01 00 00 
..\zip\boinc_zip.cpp(122) : {320} normal block at 0x000001E654041560, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{305} normal block at 0x000001E654036090, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{304} normal block at 0x000001E654046350, 16 bytes long.
 Data: < h T            > C8 68 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x000001E654045680, 16 bytes long.
 Data: < h T            > A0 68 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000001E65403FA30, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{301} normal block at 0x000001E654045B30, 16 bytes long.
 Data: <xh T            > 78 68 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001E654045630, 16 bytes long.
 Data: <Ph T            > 50 68 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001E6540461C0, 16 bytes long.
 Data: <(h T            > 28 68 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001E6540459F0, 16 bytes long.
 Data: < h T            > 00 68 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001E654043D20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{296} normal block at 0x000001E654045C70, 16 bytes long.
 Data: <(  T            > 28 B7 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001E65403F970, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{294} normal block at 0x000001E654045720, 16 bytes long.
 Data: <   T            > 00 B7 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001E654045D10, 16 bytes long.
 Data: <   T            > D8 B6 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001E654045E50, 16 bytes long.
 Data: <   T            > B0 B6 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001E654046260, 16 bytes long.
 Data: <   T            > 88 B6 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001E654045CC0, 16 bytes long.
 Data: <`  T            > 60 B6 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001E6540455E0, 16 bytes long.
 Data: <8  T            > 38 B6 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001E65403F7F0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{286} normal block at 0x000001E6540458B0, 16 bytes long.
 Data: <   T            > 10 B6 02 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001E65402B610, 320 bytes long.
 Data: < X T       T    > B0 58 04 54 E6 01 00 00 F0 F7 03 54 E6 01 00 00 
{284} normal block at 0x000001E654046080, 16 bytes long.
 Data: < g T            > E0 67 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001E6540459A0, 16 bytes long.
 Data: < g T            > B8 67 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E65403EDD0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{281} normal block at 0x000001E654045A40, 16 bytes long.
 Data: < g T            > 90 67 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001E65403F070, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{279} normal block at 0x000001E654045860, 16 bytes long.
 Data: < f T            > D8 66 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001E654045810, 16 bytes long.
 Data: < f T            > B0 66 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001E654045770, 16 bytes long.
 Data: < f T            > 88 66 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001E654045D60, 16 bytes long.
 Data: <`f T            > 60 66 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E654045BD0, 16 bytes long.
 Data: <8f T            > 38 66 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001E654045F40, 16 bytes long.
 Data: < f T            > 10 66 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001E654046170, 16 bytes long.
 Data: < : T            > 80 3A 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001E654043A80, 40 bytes long.
 Data: <pa T     { V    > 70 61 04 54 E6 01 00 00 A0 7B 16 56 E6 01 00 00 
{270} normal block at 0x000001E6540462B0, 16 bytes long.
 Data: < e T            > F0 65 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E6540456D0, 16 bytes long.
 Data: < e T            > C8 65 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001E65403F730, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{267} normal block at 0x000001E654046530, 16 bytes long.
 Data: < e T            > A0 65 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001E6540465A0, 992 bytes long.
 Data: <0e T    0  T    > 30 65 04 54 E6 01 00 00 30 F7 03 54 E6 01 00 00 
{102} normal block at 0x000001E65403F9D0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{101} normal block at 0x000001E65403D8D0, 16 bytes long.
 Data: <P8 T            > 50 38 04 54 E6 01 00 00 00 00 00 00 00 00 00 00 
{100} normal block at 0x000001E654043850, 40 bytes long.
 Data: <   T       T    > D0 D8 03 54 E6 01 00 00 D0 F9 03 54 E6 01 00 00 
{77} normal block at 0x000001E65403D3D0, 16 bytes long.
 Data: <   A            > 80 EA E2 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x000001E65403DA60, 16 bytes long.
 Data: <@  A            > 40 E9 E2 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000001E65403DF10, 16 bytes long.
 Data: < W A            > F8 57 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001E65403E0A0, 16 bytes long.
 Data: < W A            > D8 57 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001E65403D600, 16 bytes long.
 Data: <P  A            > 50 04 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001E65403DE70, 16 bytes long.
 Data: <0  A            > 30 04 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001E65403DE20, 16 bytes long.
 Data: <   A            > E0 02 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001E65403D330, 16 bytes long.
 Data: <   A            > 10 04 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001E65403D510, 16 bytes long.
 Data: <p  A            > 70 04 DF 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001E65403D4C0, 16 bytes long.
 Data: <   A            > 18 C0 DD 41 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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