Task 38683852

Name test_884-GPUGRID_TEST_ATM_40STEP_20261023-37-40-RND0240_0
Workunit 31625392
Created 27 Oct 2026, 13:37:06 UTC
Sent 27 Oct 2026, 13:37:13 UTC
Report deadline 1 Nov 2026, 13:37:13 UTC
Received 27 Oct 2026, 15:19:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 637164
Run time 25 min 46 sec
CPU time 24 min 57 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 29,356.59 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 794.48 MB
Peak swap size 25.12 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
09:54:49 (28596): wrapper (7.9.26016): starting
09:54:49 (28596): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
09:54:50 (28596): Library/usr/bin/tar.exe exited; CPU time 0.015625
09:54:50 (28596): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\15\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\15\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:19:29 (28596): C:/Windows/system32/cmd.exe exited; CPU time 1497.812500
10:19:29 (28596): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 41459965 bytes.
Dumping objects ->
{3835321} normal block at 0x000002AD496949C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835310} normal block at 0x000002AD49694950, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835299} normal block at 0x000002AD49693FB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835288} normal block at 0x000002AD496945D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835277} normal block at 0x000002AD49694B80, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835246} normal block at 0x000002AD495BC800, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835235} normal block at 0x000002AD4961E730, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835232} normal block at 0x000002AD4767FF30, 8 bytes long.
 Data: <  &#198;G&#173;   > 00 00 C6 47 AD 02 00 00 
{3834580} normal block at 0x000002AD4961ECB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000002AD4767FCB0, 8 bytes long.
 Data: <&#176;RfI&#173;   > B0 52 66 49 AD 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000002AD47676DC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002AD47677370, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000002AD47686100, 16 bytes long.
 Data: <HihG&#173;           > 48 69 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002AD47686010, 16 bytes long.
 Data: < ihG&#173;           > 20 69 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002AD476809C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000002AD47686240, 16 bytes long.
 Data: <&#248;hhG&#173;           > F8 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002AD47685B60, 16 bytes long.
 Data: <&#208;hhG&#173;           > D0 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002AD476861F0, 16 bytes long.
 Data: <&#168;hhG&#173;           > A8 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002AD47685890, 16 bytes long.
 Data: < hhG&#173;           > 80 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002AD476838C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000002AD47685B10, 16 bytes long.
 Data: <x&#250;fG&#173;           > 78 FA 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002AD47680E40, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000002AD476860B0, 16 bytes long.
 Data: <P&#250;fG&#173;           > 50 FA 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002AD47685ED0, 16 bytes long.
 Data: <(&#250;fG&#173;           > 28 FA 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002AD476857A0, 16 bytes long.
 Data: < &#250;fG&#173;           > 00 FA 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002AD47685FC0, 16 bytes long.
 Data: <&#216;&#249;fG&#173;           > D8 F9 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002AD476859D0, 16 bytes long.
 Data: <&#176;&#249;fG&#173;           > B0 F9 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002AD47686510, 16 bytes long.
 Data: < &#249;fG&#173;           > 88 F9 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002AD47681080, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000002AD47685660, 16 bytes long.
 Data: <`&#249;fG&#173;           > 60 F9 66 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002AD4766F960, 320 bytes long.
 Data: <`VhG&#173;     hG&#173;   > 60 56 68 47 AD 02 00 00 80 10 68 47 AD 02 00 00 
{277} normal block at 0x000002AD47685CA0, 16 bytes long.
 Data: <`hhG&#173;           > 60 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002AD47685700, 16 bytes long.
 Data: <8hhG&#173;           > 38 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002AD47680AE0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000002AD47685D40, 16 bytes long.
 Data: < hhG&#173;           > 10 68 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002AD47680D80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000002AD47685AC0, 16 bytes long.
 Data: <XghG&#173;           > 58 67 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002AD47686380, 16 bytes long.
 Data: <0ghG&#173;           > 30 67 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002AD476858E0, 16 bytes long.
 Data: < ghG&#173;           > 08 67 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002AD476865B0, 16 bytes long.
 Data: <&#224;fhG&#173;           > E0 66 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002AD47685DE0, 16 bytes long.
 Data: <&#184;fhG&#173;           > B8 66 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002AD47685A70, 16 bytes long.
 Data: < fhG&#173;           > 90 66 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002AD476863D0, 16 bytes long.
 Data: <&#224;7hG&#173;           > E0 37 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002AD476837E0, 40 bytes long.
 Data: <&#208;chG&#173;    &#200;[I&#173;   > D0 63 68 47 AD 02 00 00 00 C8 5B 49 AD 02 00 00 
{263} normal block at 0x000002AD47685CF0, 16 bytes long.
 Data: <pfhG&#173;           > 70 66 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002AD476861A0, 16 bytes long.
 Data: <HfhG&#173;           > 48 66 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002AD47680CC0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000002AD47685840, 16 bytes long.
 Data: < fhG&#173;           > 20 66 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002AD47686620, 992 bytes long.
 Data: <@XhG&#173;   &#192; hG&#173;   > 40 58 68 47 AD 02 00 00 C0 0C 68 47 AD 02 00 00 
{95} normal block at 0x000002AD47680B40, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000002AD47680250, 16 bytes long.
 Data: <&#160;9hG&#173;           > A0 39 68 47 AD 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000002AD476839A0, 40 bytes long.
 Data: <P hG&#173;   @ hG&#173;   > 50 02 68 47 AD 02 00 00 40 0B 68 47 AD 02 00 00 
{72} normal block at 0x000002AD47680200, 16 bytes long.
 Data: < &#234;&#215;t&#246;           > 80 EA D7 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002AD4767FDF0, 16 bytes long.
 Data: <@&#233;&#215;t&#246;           > 40 E9 D7 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002AD4767FEE0, 16 bytes long.
 Data: <&#248;W&#212;t&#246;           > F8 57 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002AD476802F0, 16 bytes long.
 Data: <&#216;W&#212;t&#246;           > D8 57 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002AD476807F0, 16 bytes long.
 Data: <P &#212;t&#246;           > 50 04 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002AD476807A0, 16 bytes long.
 Data: <0 &#212;t&#246;           > 30 04 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002AD4767FD50, 16 bytes long.
 Data: <&#224; &#212;t&#246;           > E0 02 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002AD4767F990, 16 bytes long.
 Data: <  &#212;t&#246;           > 10 04 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002AD4767FC10, 16 bytes long.
 Data: <p &#212;t&#246;           > 70 04 D4 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002AD476802A0, 16 bytes long.
 Data: < &#192;&#210;t&#246;           > 18 C0 D2 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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