Task 38683754

Name test_621-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND1906_0
Workunit 31625300
Created 27 Oct 2026, 13:09:37 UTC
Sent 27 Oct 2026, 13:09:38 UTC
Report deadline 1 Nov 2026, 13:09:38 UTC
Received 27 Oct 2026, 14:53:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654622
Run time 58 min 39 sec
CPU time 41 min 31 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,353.06 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 7.15 GB
Peak swap size 6.85 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:12:59 (40620): wrapper (7.9.26016): starting
21:12:59 (40620): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:13:00 (40620): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:13:00 (40620): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:09:49 (40620): C:/Windows/system32/cmd.exe exited; CPU time 2491.328125
22:09:49 (40620): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 71553295 bytes.
Dumping objects ->
{3835294} normal block at 0x00000150D3FC8120, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835283} normal block at 0x00000150D3FC74E0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835272} normal block at 0x00000150D20B4FD0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835261} normal block at 0x00000150D20B4CC0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835250} normal block at 0x00000150D20B4C50, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835219} normal block at 0x00000150D3FD52C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835205} normal block at 0x00000150D20AFE20, 8 bytes long.
 Data: <    P   > 00 00 A1 D3 50 01 00 00 
{3834057} normal block at 0x00000150D20B0640, 8 bytes long.
 Data: <` 	 P   > 60 E1 09 D2 50 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x00000150D20B13D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000150D20A63A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000150D20B6380, 16 bytes long.
 Data: < l  P           > 18 6C 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000150D20B5930, 16 bytes long.
 Data: < k  P           > F0 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000150D20AF8F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000150D20B5B60, 16 bytes long.
 Data: < k  P           > C8 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000150D20B61F0, 16 bytes long.
 Data: < k  P           > A0 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000150D20B61A0, 16 bytes long.
 Data: <xk  P           > 78 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000150D20B6600, 16 bytes long.
 Data: <Pk  P           > 50 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000150D20B4DA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000150D20B5ED0, 16 bytes long.
 Data: <H   P           > 48 93 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000150D20AF170, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000150D20B6100, 16 bytes long.
 Data: <    P           > 20 93 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000150D20B59D0, 16 bytes long.
 Data: <    P           > F8 92 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000150D20B5D40, 16 bytes long.
 Data: <    P           > D0 92 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000150D20B64C0, 16 bytes long.
 Data: <    P           > A8 92 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000150D20B5AC0, 16 bytes long.
 Data: <    P           > 80 92 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000150D20B5BB0, 16 bytes long.
 Data: <X   P           > 58 92 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000150D20AEC90, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000150D20B5B10, 16 bytes long.
 Data: <0   P           > 30 92 0A D2 50 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000150D20A9230, 320 bytes long.
 Data: < [  P       P   > 10 5B 0B D2 50 01 00 00 90 EC 0A D2 50 01 00 00 
{276} normal block at 0x00000150D20B60B0, 16 bytes long.
 Data: <0k  P           > 30 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000150D20B6880, 16 bytes long.
 Data: < k  P           > 08 6B 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000150D20AF290, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000150D20B5C50, 16 bytes long.
 Data: < j  P           > E0 6A 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000150D20AEE70, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000150D20B6420, 16 bytes long.
 Data: <(j  P           > 28 6A 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000150D20B62E0, 16 bytes long.
 Data: < j  P           > 00 6A 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000150D20B5E30, 16 bytes long.
 Data: < i  P           > D8 69 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000150D20B5CF0, 16 bytes long.
 Data: < i  P           > B0 69 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000150D20B67E0, 16 bytes long.
 Data: < i  P           > 88 69 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000150D20B6330, 16 bytes long.
 Data: <`i  P           > 60 69 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000150D20B6650, 16 bytes long.
 Data: < Q  P           > 20 51 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000150D20B5120, 40 bytes long.
 Data: <Pf  P    R  P   > 50 66 0B D2 50 01 00 00 C0 52 FD D3 50 01 00 00 
{262} normal block at 0x00000150D20B6060, 16 bytes long.
 Data: <@i  P           > 40 69 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000150D20B5D90, 16 bytes long.
 Data: < i  P           > 18 69 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000150D20AEFF0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000150D20B5E80, 16 bytes long.
 Data: < h  P           > F0 68 0B D2 50 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000150D20B68F0, 992 bytes long.
 Data: < ^  P       P   > 80 5E 0B D2 50 01 00 00 F0 EF 0A D2 50 01 00 00 
{94} normal block at 0x00000150D20AEE10, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000150D20AFEC0, 16 bytes long.
 Data: <@ 	 P           > 40 F0 09 D2 50 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x00000150D209F040, 40 bytes long.
 Data: <    P       P   > C0 FE 0A D2 50 01 00 00 10 EE 0A D2 50 01 00 00 
{69} normal block at 0x00000150D20B0320, 16 bytes long.
 Data: <  mt            > 80 EA 6D 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000150D20B0690, 16 bytes long.
 Data: <@ mt            > 40 E9 6D 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000150D20B01E0, 16 bytes long.
 Data: < Wjt            > F8 57 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000150D20B0000, 16 bytes long.
 Data: < Wjt            > D8 57 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000150D20AFDD0, 16 bytes long.
 Data: <P jt            > 50 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000150D20B0B40, 16 bytes long.
 Data: <0 jt            > 30 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000150D20AFCE0, 16 bytes long.
 Data: <  jt            > E0 02 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000150D20B0280, 16 bytes long.
 Data: <  jt            > 10 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000150D20B0550, 16 bytes long.
 Data: <p jt            > 70 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000150D20B0AF0, 16 bytes long.
 Data: <  ht            > 18 C0 68 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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