Task 38683561

Name test_412-GPUGRID_TEST_ATM_40STEP_20261023-36-40-RND2255_0
Workunit 31625115
Created 27 Oct 2026, 12:17:49 UTC
Sent 27 Oct 2026, 12:17:56 UTC
Report deadline 1 Nov 2026, 12:17:56 UTC
Received 27 Oct 2026, 12:47:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 523908
Run time 29 min 6 sec
CPU time 27 min 34 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 56,279.60 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 747.96 MB
Peak swap size 13.05 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
13:18:40 (19264): wrapper (7.9.26016): starting
13:18:40 (19264): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:18:41 (19264): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:18:41 (19264): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:47:05 (19264): C:/Windows/system32/cmd.exe exited; CPU time 1654.265625
13:47:05 (19264): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 22431201 bytes.
Dumping objects ->
{3835235} normal block at 0x000001104F2E8460, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835224} normal block at 0x000001104F2E83F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835213} normal block at 0x000001104F2E8690, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835202} normal block at 0x000001104F2E8930, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835191} normal block at 0x000001104D4A4A70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835160} normal block at 0x000001104F2F86C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835149} normal block at 0x000001104F30E0E0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835146} normal block at 0x000001104D49E6C0, 8 bytes long.
 Data: <  &#151;M    > 00 00 97 4D 10 01 00 00 
{3834542} normal block at 0x000001104F30DF80, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001104D49F3E0, 8 bytes long.
 Data: <&#160;D5O    > A0 44 35 4F 10 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001104D4A10E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001104D496760, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001104D4A5120, 16 bytes long.
 Data: <&#184;cJM            > B8 63 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001104D4A5F80, 16 bytes long.
 Data: < cJM            > 90 63 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001104D49FB90, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001104D4A5DF0, 16 bytes long.
 Data: <hcJM            > 68 63 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001104D4A5BC0, 16 bytes long.
 Data: <@cJM            > 40 63 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001104D4A5A80, 16 bytes long.
 Data: < cJM            > 18 63 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001104D4A56C0, 16 bytes long.
 Data: <&#240;bJM            > F0 62 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001104D4A4530, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001104D4A5C10, 16 bytes long.
 Data: <&#168;&#228;IM            > A8 E4 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001104D49F9B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001104D4A5210, 16 bytes long.
 Data: < &#228;IM            > 80 E4 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001104D4A5A30, 16 bytes long.
 Data: <X&#228;IM            > 58 E4 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001104D4A58F0, 16 bytes long.
 Data: <0&#228;IM            > 30 E4 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001104D4A59E0, 16 bytes long.
 Data: < &#228;IM            > 08 E4 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001104D4A51C0, 16 bytes long.
 Data: <&#224;&#227;IM            > E0 E3 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001104D4A5850, 16 bytes long.
 Data: <&#184;&#227;IM            > B8 E3 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001104D49F890, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001104D4A54E0, 16 bytes long.
 Data: < &#227;IM            > 90 E3 49 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001104D49E390, 320 bytes long.
 Data: <&#224;TJM     &#248;IM    > E0 54 4A 4D 10 01 00 00 90 F8 49 4D 10 01 00 00 
{276} normal block at 0x000001104D4A5440, 16 bytes long.
 Data: <&#208;bJM            > D0 62 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001104D4A58A0, 16 bytes long.
 Data: <&#168;bJM            > A8 62 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001104D49FCB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001104D4A5800, 16 bytes long.
 Data: < bJM            > 80 62 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001104D4A0490, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001104D4A5E90, 16 bytes long.
 Data: <&#200;aJM            > C8 61 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001104D4A5B70, 16 bytes long.
 Data: <&#160;aJM            > A0 61 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001104D4A50D0, 16 bytes long.
 Data: <xaJM            > 78 61 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001104D4A5B20, 16 bytes long.
 Data: <PaJM            > 50 61 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001104D4A5620, 16 bytes long.
 Data: <(aJM            > 28 61 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001104D4A5E40, 16 bytes long.
 Data: < aJM            > 00 61 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001104D4A5760, 16 bytes long.
 Data: <`GJM            > 60 47 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001104D4A4760, 40 bytes long.
 Data: <`WJM    &#192;&#134;/O    > 60 57 4A 4D 10 01 00 00 C0 86 2F 4F 10 01 00 00 
{262} normal block at 0x000001104D4A5490, 16 bytes long.
 Data: <&#224;`JM            > E0 60 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001104D4A53A0, 16 bytes long.
 Data: <&#184;`JM            > B8 60 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001104D49F770, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001104D4A5670, 16 bytes long.
 Data: < `JM            > 90 60 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001104D4A6090, 992 bytes long.
 Data: <pVJM    p&#247;IM    > 70 56 4A 4D 10 01 00 00 70 F7 49 4D 10 01 00 00 
{94} normal block at 0x000001104D49F710, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001104D49EA80, 16 bytes long.
 Data: <&#192;KJM            > C0 4B 4A 4D 10 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001104D4A4BC0, 40 bytes long.
 Data: < &#234;IM     &#247;IM    > 80 EA 49 4D 10 01 00 00 10 F7 49 4D 10 01 00 00 
{71} normal block at 0x000001104D49F250, 16 bytes long.
 Data: < &#234;&#204; &#247;           > 80 EA CC 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001104D49EFD0, 16 bytes long.
 Data: <@&#233;&#204; &#247;           > 40 E9 CC 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001104D49EE90, 16 bytes long.
 Data: <&#248;W&#201; &#247;           > F8 57 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001104D49EAD0, 16 bytes long.
 Data: <&#216;W&#201; &#247;           > D8 57 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001104D49F340, 16 bytes long.
 Data: <P &#201; &#247;           > 50 04 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001104D49F070, 16 bytes long.
 Data: <0 &#201; &#247;           > 30 04 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001104D49E9E0, 16 bytes long.
 Data: <&#224; &#201; &#247;           > E0 02 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001104D49E670, 16 bytes long.
 Data: <  &#201; &#247;           > 10 04 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001104D49F390, 16 bytes long.
 Data: <p &#201; &#247;           > 70 04 C9 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001104D49EE40, 16 bytes long.
 Data: < &#192;&#199; &#247;           > 18 C0 C7 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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