Task 38683513

Name test_805-GPUGRID_TEST_ATM_40STEP_20261023-36-40-RND1243_0
Workunit 31625067
Created 27 Oct 2026, 12:05:37 UTC
Sent 27 Oct 2026, 12:05:40 UTC
Report deadline 1 Nov 2026, 12:05:40 UTC
Received 27 Oct 2026, 14:07:28 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 514949
Run time 43 min 35 sec
CPU time 40 min 13 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 11,343.40 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 670.97 MB
Peak swap size 5.30 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:24:09 (16596): wrapper (7.9.26016): starting
08:24:09 (16596): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
08:24:10 (16596): Library/usr/bin/tar.exe exited; CPU time 0.000000
08:24:10 (16596): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
09:07:01 (16596): C:/Windows/system32/cmd.exe exited; CPU time 2413.500000
09:07:01 (16596): called boinc_finish(0)
0 bytes in 0 Free Blocks.
526 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 41026865 bytes.
Dumping objects ->
{3835319} normal block at 0x00000253C0566260, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835308} normal block at 0x00000253C05661F0, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835297} normal block at 0x00000253C05667A0, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835286} normal block at 0x00000253BE81D6B0, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x00000253BE81DD40, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835244} normal block at 0x00000253C047C780, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x00000253C0569310, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835230} normal block at 0x00000253BE816EE0, 8 bytes long.
 Data: <   &#190;S   > 00 00 7F BE 53 02 00 00 
{3834589} normal block at 0x00000253C0569240, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833949} normal block at 0x00000253BE817070, 8 bytes long.
 Data: <@PV&#192;S   > 40 50 56 C0 53 02 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x00000253BE8209E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000253BE80B3A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x00000253BE822600, 16 bytes long.
 Data: <(@&#130;&#190;S           > 28 40 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000253BE8225B0, 16 bytes long.
 Data: < @&#130;&#190;S           > 00 40 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000253BE81C4D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x00000253BE822510, 16 bytes long.
 Data: <&#216;?&#130;&#190;S           > D8 3F 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000253BE8224C0, 16 bytes long.
 Data: <&#176;?&#130;&#190;S           > B0 3F 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000253BE8223D0, 16 bytes long.
 Data: < ?&#130;&#190;S           > 88 3F 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000253BE821E30, 16 bytes long.
 Data: <`?&#130;&#190;S           > 60 3F 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000253BE81DB10, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x00000253BE8222E0, 16 bytes long.
 Data: <H&#210; &#190;S           > 48 D2 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000253BE81BC90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x00000253BE821DE0, 16 bytes long.
 Data: < &#210; &#190;S           > 20 D2 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000253BE822290, 16 bytes long.
 Data: <&#248;&#209; &#190;S           > F8 D1 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000253BE8221F0, 16 bytes long.
 Data: <&#208;&#209; &#190;S           > D0 D1 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000253BE822330, 16 bytes long.
 Data: <&#168;&#209; &#190;S           > A8 D1 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000253BE8221A0, 16 bytes long.
 Data: < &#209; &#190;S           > 80 D1 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000253BE821A20, 16 bytes long.
 Data: <X&#209; &#190;S           > 58 D1 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000253BE81BF30, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{272} normal block at 0x00000253BE822100, 16 bytes long.
 Data: <0&#209; &#190;S           > 30 D1 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000253BE81D130, 320 bytes long.
 Data: < !&#130;&#190;S   0&#191; &#190;S   > 00 21 82 BE 53 02 00 00 30 BF 81 BE 53 02 00 00 
{270} normal block at 0x00000253BE8220B0, 16 bytes long.
 Data: <@?&#130;&#190;S           > 40 3F 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000253BE822470, 16 bytes long.
 Data: < ?&#130;&#190;S           > 18 3F 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000253BE81BB70, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x00000253BE822650, 16 bytes long.
 Data: <&#240;>&#130;&#190;S           > F0 3E 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000253BE81BED0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x00000253BE822060, 16 bytes long.
 Data: <8>&#130;&#190;S           > 38 3E 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000253BE822560, 16 bytes long.
 Data: < >&#130;&#190;S           > 10 3E 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000253BE821D90, 16 bytes long.
 Data: <&#232;=&#130;&#190;S           > E8 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000253BE821D40, 16 bytes long.
 Data: <&#192;=&#130;&#190;S           > C0 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000253BE821C00, 16 bytes long.
 Data: < =&#130;&#190;S           > 98 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000253BE822420, 16 bytes long.
 Data: <p=&#130;&#190;S           > 70 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000253BE822010, 16 bytes long.
 Data: <0&#218; &#190;S           > 30 DA 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000253BE81DA30, 40 bytes long.
 Data: <  &#130;&#190;S    &#199;G&#192;S   > 10 20 82 BE 53 02 00 00 80 C7 47 C0 53 02 00 00 
{256} normal block at 0x00000253BE821980, 16 bytes long.
 Data: <P=&#130;&#190;S           > 50 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000253BE821A70, 16 bytes long.
 Data: <(=&#130;&#190;S           > 28 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000253BE81C350, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x00000253BE821BB0, 16 bytes long.
 Data: < =&#130;&#190;S           > 00 3D 82 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000253BE823D00, 992 bytes long.
 Data: <&#176; &#130;&#190;S   P&#195; &#190;S   > B0 1B 82 BE 53 02 00 00 50 C3 81 BE 53 02 00 00 
{88} normal block at 0x00000253BE81B9F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x00000253BE816BC0, 16 bytes long.
 Data: <&#224;&#216; &#190;S           > E0 D8 81 BE 53 02 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x00000253BE81D8E0, 40 bytes long.
 Data: <&#192;k &#190;S   &#240;&#185; &#190;S   > C0 6B 81 BE 53 02 00 00 F0 B9 81 BE 53 02 00 00 
{65} normal block at 0x00000253BE8169E0, 16 bytes long.
 Data: < &#234;  &#247;           > 80 EA 1C 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000253BE816B70, 16 bytes long.
 Data: <@&#233;  &#247;           > 40 E9 1C 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000253BE816DF0, 16 bytes long.
 Data: <&#248;W  &#247;           > F8 57 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000253BE817570, 16 bytes long.
 Data: <&#216;W  &#247;           > D8 57 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000253BE816B20, 16 bytes long.
 Data: <P   &#247;           > 50 04 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000253BE8173E0, 16 bytes long.
 Data: <0   &#247;           > 30 04 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000253BE817890, 16 bytes long.
 Data: <&#224;   &#247;           > E0 02 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000253BE8177F0, 16 bytes long.
 Data: <    &#247;           > 10 04 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000253BE817520, 16 bytes long.
 Data: <p   &#247;           > 70 04 19 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000253BE8178E0, 16 bytes long.
 Data: < &#192;  &#247;           > 18 C0 17 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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