Task 38683448

Name test_726-GPUGRID_TEST_ATM_40STEP_20261023-34-40-RND1953_0
Workunit 31625004
Created 27 Oct 2026, 11:51:44 UTC
Sent 27 Oct 2026, 11:51:48 UTC
Report deadline 1 Nov 2026, 11:51:48 UTC
Received 27 Oct 2026, 13:30:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 625863
Run time 24 min 48 sec
CPU time 23 min 23 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 58,064.43 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.48 MB
Peak swap size 13.04 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
15:06:46 (4544): wrapper (7.9.26016): starting
15:06:46 (4544): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
15:06:47 (4544): Library/usr/bin/tar.exe exited; CPU time 0.000000
15:06:47 (4544): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\27\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\27\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:30:40 (4544): C:/Windows/system32/cmd.exe exited; CPU time 1403.468750
15:30:40 (4544): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 28082865 bytes.
Dumping objects ->
{3835575} normal block at 0x0000024DAC58F420, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835564} normal block at 0x0000024DAC58EE70, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835553} normal block at 0x0000024DAC58F110, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835542} normal block at 0x0000024DAC58F5E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835531} normal block at 0x0000024DAA977740, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835500} normal block at 0x0000024DAC5D68B0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835489} normal block at 0x0000024DAA9CF850, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835486} normal block at 0x0000024DAA96BB30, 8 bytes long.
 Data: <  &#147;&#170;M   > 00 00 93 AA 4D 02 00 00 
{3834707} normal block at 0x0000024DAA9D0210, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833975} normal block at 0x0000024DAA96BE50, 8 bytes long.
 Data: <&#176;sc&#172;M   > B0 73 63 AC 4D 02 00 00 
..\zip\boinc_zip.cpp(122) : {319} normal block at 0x0000024DAA973520, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{304} normal block at 0x0000024DAA967A70, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{303} normal block at 0x0000024DAA978420, 16 bytes long.
 Data: <H&#142;&#151;&#170;M           > 48 8E 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000024DAA978290, 16 bytes long.
 Data: < &#142;&#151;&#170;M           > 20 8E 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000024DAA96FC30, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{300} normal block at 0x0000024DAA9786A0, 16 bytes long.
 Data: <&#248; &#151;&#170;M           > F8 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000024DAA978650, 16 bytes long.
 Data: <&#208; &#151;&#170;M           > D0 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000024DAA977D40, 16 bytes long.
 Data: <&#168; &#151;&#170;M           > A8 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000024DAA977ED0, 16 bytes long.
 Data: <  &#151;&#170;M           > 80 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000024DAA977510, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{295} normal block at 0x0000024DAA977CA0, 16 bytes long.
 Data: <&#248; &#150;&#170;M           > F8 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000024DAA96FB70, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{293} normal block at 0x0000024DAA9783D0, 16 bytes long.
 Data: <&#208; &#150;&#170;M           > D0 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000024DAA978150, 16 bytes long.
 Data: <&#168; &#150;&#170;M           > A8 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000024DAA977CF0, 16 bytes long.
 Data: <  &#150;&#170;M           > 80 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000024DAA977E80, 16 bytes long.
 Data: <X &#150;&#170;M           > 58 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000024DAA978560, 16 bytes long.
 Data: <0 &#150;&#170;M           > 30 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000024DAA9788D0, 16 bytes long.
 Data: <  &#150;&#170;M           > 08 07 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000024DAA96FFF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{285} normal block at 0x0000024DAA977C50, 16 bytes long.
 Data: <&#224; &#150;&#170;M           > E0 06 96 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000024DAA9606E0, 320 bytes long.
 Data: <P|&#151;&#170;M   &#240;&#255;&#150;&#170;M   > 50 7C 97 AA 4D 02 00 00 F0 FF 96 AA 4D 02 00 00 
{283} normal block at 0x0000024DAA9780B0, 16 bytes long.
 Data: <` &#151;&#170;M           > 60 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000024DAA978010, 16 bytes long.
 Data: <8 &#151;&#170;M           > 38 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000024DAA96FB10, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{280} normal block at 0x0000024DAA978A60, 16 bytes long.
 Data: <  &#151;&#170;M           > 10 8D 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000024DAA96FAB0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{278} normal block at 0x0000024DAA978380, 16 bytes long.
 Data: <X&#140;&#151;&#170;M           > 58 8C 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000024DAA978600, 16 bytes long.
 Data: <0&#140;&#151;&#170;M           > 30 8C 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000024DAA977E30, 16 bytes long.
 Data: < &#140;&#151;&#170;M           > 08 8C 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000024DAA977DE0, 16 bytes long.
 Data: <&#224;&#139;&#151;&#170;M           > E0 8B 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000024DAA977F20, 16 bytes long.
 Data: <&#184;&#139;&#151;&#170;M           > B8 8B 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000024DAA978970, 16 bytes long.
 Data: < &#139;&#151;&#170;M           > 90 8B 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000024DAA978880, 16 bytes long.
 Data: <`v&#151;&#170;M           > 60 76 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000024DAA977660, 40 bytes long.
 Data: <  &#151;&#170;M   &#176;h]&#172;M   > 80 88 97 AA 4D 02 00 00 B0 68 5D AC 4D 02 00 00 
{269} normal block at 0x0000024DAA978830, 16 bytes long.
 Data: <p&#139;&#151;&#170;M           > 70 8B 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000024DAA9789C0, 16 bytes long.
 Data: <H&#139;&#151;&#170;M           > 48 8B 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000024DAA970470, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{266} normal block at 0x0000024DAA977D90, 16 bytes long.
 Data: < &#139;&#151;&#170;M           > 20 8B 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000024DAA978B20, 992 bytes long.
 Data: < }&#151;&#170;M   p &#151;&#170;M   > 90 7D 97 AA 4D 02 00 00 70 04 97 AA 4D 02 00 00 
{101} normal block at 0x0000024DAA96FED0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{100} normal block at 0x0000024DAA96B720, 16 bytes long.
 Data: <&#176;w&#151;&#170;M           > B0 77 97 AA 4D 02 00 00 00 00 00 00 00 00 00 00 
{99} normal block at 0x0000024DAA9777B0, 40 bytes long.
 Data: < &#183;&#150;&#170;M   &#208;&#254;&#150;&#170;M   > 20 B7 96 AA 4D 02 00 00 D0 FE 96 AA 4D 02 00 00 
{78} normal block at 0x0000024DAA96C530, 16 bytes long.
 Data: < &#234;  &#247;           > 80 EA 13 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x0000024DAA96BB80, 16 bytes long.
 Data: <@&#233;  &#247;           > 40 E9 13 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x0000024DAA96BE00, 16 bytes long.
 Data: <&#248;W  &#247;           > F8 57 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x0000024DAA96B810, 16 bytes long.
 Data: <&#216;W  &#247;           > D8 57 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000024DAA96C620, 16 bytes long.
 Data: <P   &#247;           > 50 04 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000024DAA96C2B0, 16 bytes long.
 Data: <0   &#247;           > 30 04 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000024DAA96C170, 16 bytes long.
 Data: <&#224;   &#247;           > E0 02 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000024DAA96C0D0, 16 bytes long.
 Data: <    &#247;           > 10 04 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000024DAA96B9F0, 16 bytes long.
 Data: <p   &#247;           > 70 04 10 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000024DAA96C3F0, 16 bytes long.
 Data: < &#192;  &#247;           > 18 C0 0E 8D F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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