Task 38682965

Name test_55-GPUGRID_TEST_ATM_40STEP_20261023-33-40-RND9258_0
Workunit 31624556
Created 27 Oct 2026, 9:52:56 UTC
Sent 27 Oct 2026, 9:53:04 UTC
Report deadline 1 Nov 2026, 9:53:04 UTC
Received 27 Oct 2026, 10:32:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 638094
Run time 22 min 8 sec
CPU time 21 min 5 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 41,014.83 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 741.95 MB
Peak swap size 12.99 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:10:43 (28096): wrapper (7.9.26016): starting
21:10:43 (28096): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:10:44 (28096): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:10:44 (28096): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\34\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\34\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:31:58 (28096): C:/Windows/system32/cmd.exe exited; CPU time 1265.250000
21:31:58 (28096): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23452179 bytes.
Dumping objects ->
{3835652} normal block at 0x000001D3EA9DCDD0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835641} normal block at 0x000001D3EA9DD4D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835630} normal block at 0x000001D3E8CF4590, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835619} normal block at 0x000001D3E8CF4B40, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835608} normal block at 0x000001D3E8CF4AD0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835577} normal block at 0x000001D3EAA279C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835566} normal block at 0x000001D3EAA3EBC0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835563} normal block at 0x000001D3E8CEEF30, 8 bytes long.
 Data: <  (&#233;&#211;   > 00 00 28 E9 D3 01 00 00 
{3834735} normal block at 0x000001D3EAA3E640, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833971} normal block at 0x000001D3E8CEEEE0, 8 bytes long.
 Data: <`&#235;&#147;&#234;&#211;   > 60 EB 93 EA D3 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x000001D3E8CF1610, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000001D3E8CE0C60, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x000001D3E8CF55C0, 16 bytes long.
 Data: <&#168;c&#207;&#232;&#211;           > A8 63 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001D3E8CF5DE0, 16 bytes long.
 Data: < c&#207;&#232;&#211;           > 80 63 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001D3E8CEDC40, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x000001D3E8CF5570, 16 bytes long.
 Data: <Xc&#207;&#232;&#211;           > 58 63 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001D3E8CF5F70, 16 bytes long.
 Data: <0c&#207;&#232;&#211;           > 30 63 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001D3E8CF57F0, 16 bytes long.
 Data: < c&#207;&#232;&#211;           > 08 63 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001D3E8CF5BB0, 16 bytes long.
 Data: <&#224;b&#207;&#232;&#211;           > E0 62 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001D3E8CF4600, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x000001D3E8CF5F20, 16 bytes long.
 Data: <H &#206;&#232;&#211;           > 48 8F CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001D3E8CED7C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x000001D3E8CF50C0, 16 bytes long.
 Data: <  &#206;&#232;&#211;           > 20 8F CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001D3E8CF59D0, 16 bytes long.
 Data: <&#248;&#142;&#206;&#232;&#211;           > F8 8E CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001D3E8CF57A0, 16 bytes long.
 Data: <&#208;&#142;&#206;&#232;&#211;           > D0 8E CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001D3E8CF5D90, 16 bytes long.
 Data: <&#168;&#142;&#206;&#232;&#211;           > A8 8E CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001D3E8CF54D0, 16 bytes long.
 Data: < &#142;&#206;&#232;&#211;           > 80 8E CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001D3E8CF5700, 16 bytes long.
 Data: <X&#142;&#206;&#232;&#211;           > 58 8E CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001D3E8CEDB80, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x000001D3E8CF5B60, 16 bytes long.
 Data: <0&#142;&#206;&#232;&#211;           > 30 8E CE E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001D3E8CE8E30, 320 bytes long.
 Data: <`[&#207;&#232;&#211;    &#219;&#206;&#232;&#211;   > 60 5B CF E8 D3 01 00 00 80 DB CE E8 D3 01 00 00 
{281} normal block at 0x000001D3E8CF5E80, 16 bytes long.
 Data: <&#192;b&#207;&#232;&#211;           > C0 62 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001D3E8CF5980, 16 bytes long.
 Data: < b&#207;&#232;&#211;           > 98 62 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001D3E8CED3A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x000001D3E8CF5930, 16 bytes long.
 Data: <pb&#207;&#232;&#211;           > 70 62 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001D3E8CEDEE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x000001D3E8CF5AC0, 16 bytes long.
 Data: <&#184;a&#207;&#232;&#211;           > B8 61 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001D3E8CF5390, 16 bytes long.
 Data: < a&#207;&#232;&#211;           > 90 61 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001D3E8CF58E0, 16 bytes long.
 Data: <ha&#207;&#232;&#211;           > 68 61 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001D3E8CF56B0, 16 bytes long.
 Data: <@a&#207;&#232;&#211;           > 40 61 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001D3E8CF5480, 16 bytes long.
 Data: < a&#207;&#232;&#211;           > 18 61 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001D3E8CF5B10, 16 bytes long.
 Data: <&#240;`&#207;&#232;&#211;           > F0 60 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001D3E8CF5660, 16 bytes long.
 Data: <&#160;H&#207;&#232;&#211;           > A0 48 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001D3E8CF48A0, 40 bytes long.
 Data: <`V&#207;&#232;&#211;   &#192;y&#162;&#234;&#211;   > 60 56 CF E8 D3 01 00 00 C0 79 A2 EA D3 01 00 00 
{267} normal block at 0x000001D3E8CF5520, 16 bytes long.
 Data: <&#208;`&#207;&#232;&#211;           > D0 60 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001D3E8CF53E0, 16 bytes long.
 Data: <&#168;`&#207;&#232;&#211;           > A8 60 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001D3E8CEDE80, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x000001D3E8CF5340, 16 bytes long.
 Data: < `&#207;&#232;&#211;           > 80 60 CF E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001D3E8CF6080, 992 bytes long.
 Data: <@S&#207;&#232;&#211;    &#222;&#206;&#232;&#211;   > 40 53 CF E8 D3 01 00 00 80 DE CE E8 D3 01 00 00 
{99} normal block at 0x000001D3E8CED280, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x000001D3E8CEF0C0, 16 bytes long.
 Data: < &#196;&#205;&#232;&#211;           > 10 C4 CD E8 D3 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x000001D3E8CDC410, 40 bytes long.
 Data: <&#192;&#240;&#206;&#232;&#211;    &#210;&#206;&#232;&#211;   > C0 F0 CE E8 D3 01 00 00 80 D2 CE E8 D3 01 00 00 
{76} normal block at 0x000001D3E8CEEDA0, 16 bytes long.
 Data: < &#234;  &#247;           > 80 EA 13 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000001D3E8CEE990, 16 bytes long.
 Data: <@&#233;  &#247;           > 40 E9 13 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001D3E8CEF2F0, 16 bytes long.
 Data: <&#248;W  &#247;           > F8 57 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001D3E8CEEB20, 16 bytes long.
 Data: <&#216;W  &#247;           > D8 57 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001D3E8CEF390, 16 bytes long.
 Data: <P   &#247;           > 50 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001D3E8CEED00, 16 bytes long.
 Data: <0   &#247;           > 30 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001D3E8CEEC10, 16 bytes long.
 Data: <&#224;   &#247;           > E0 02 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001D3E8CEF570, 16 bytes long.
 Data: <    &#247;           > 10 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001D3E8CEF520, 16 bytes long.
 Data: <p   &#247;           > 70 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001D3E8CEECB0, 16 bytes long.
 Data: < &#192;  &#247;           > 18 C0 0E 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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