Task 38682942

Name test_443-GPUGRID_TEST_ATM_40STEP_20261023-23-40-RND4852_0
Workunit 31624533
Created 27 Oct 2026, 9:46:25 UTC
Sent 27 Oct 2026, 9:46:26 UTC
Report deadline 1 Nov 2026, 9:46:26 UTC
Received 27 Oct 2026, 10:08:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610687
Run time 20 min 59 sec
CPU time 19 min 35 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 32,259.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 761.62 MB
Peak swap size 12.98 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
11:48:22 (36412): wrapper (7.9.26016): starting
11:48:22 (36412): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:48:23 (36412): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:48:23 (36412): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:08:32 (36412): C:/Windows/system32/cmd.exe exited; CPU time 1175.843750
12:08:32 (36412): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 26209477 bytes.
Dumping objects ->
{3835275} normal block at 0x00000212EDD07F40, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835264} normal block at 0x00000212EC0F4160, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835253} normal block at 0x00000212EC0F40F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835242} normal block at 0x00000212EC0F4080, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835231} normal block at 0x00000212EC0F4010, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835200} normal block at 0x00000212EDEF86F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835187} normal block at 0x00000212EC0EE180, 8 bytes long.
 Data: <   &#236;    > 00 00 0B EC 12 02 00 00 
{3833939} normal block at 0x00000212EC0EDEB0, 8 bytes long.
 Data: <`&#138; &#236;    > 60 8A 11 EC 12 02 00 00 
..\zip\boinc_zip.cpp(122) : {301} normal block at 0x00000212EC0EF000, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000212EC0E5710, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{285} normal block at 0x00000212EC0F5370, 16 bytes long.
 Data: <&#200;H &#236;            > C8 48 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000212EC0F4EC0, 16 bytes long.
 Data: <&#160;H &#236;            > A0 48 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000212EC0F28C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{282} normal block at 0x00000212EC0F5690, 16 bytes long.
 Data: <xH &#236;            > 78 48 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000212EC0F4DD0, 16 bytes long.
 Data: <PH &#236;            > 50 48 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000212EC0F5820, 16 bytes long.
 Data: <(H &#236;            > 28 48 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000212EC0F5550, 16 bytes long.
 Data: < H &#236;            > 00 48 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000212EC0F41D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{277} normal block at 0x00000212EC0F57D0, 16 bytes long.
 Data: < D &#236;            > 88 44 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000212EC0F3220, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{275} normal block at 0x00000212EC0F54B0, 16 bytes long.
 Data: <`D &#236;            > 60 44 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000212EC0F5410, 16 bytes long.
 Data: <8D &#236;            > 38 44 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000212EC0F5320, 16 bytes long.
 Data: < D &#236;            > 10 44 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000212EC0F4E20, 16 bytes long.
 Data: <&#232;C &#236;            > E8 43 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000212EC0F5780, 16 bytes long.
 Data: <&#192;C &#236;            > C0 43 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000212EC0F5500, 16 bytes long.
 Data: < C &#236;            > 98 43 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000212EC0F30A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{267} normal block at 0x00000212EC0F5190, 16 bytes long.
 Data: <pC &#236;            > 70 43 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000212EC0F4370, 320 bytes long.
 Data: < Q &#236;    &#160;0 &#236;    > 90 51 0F EC 12 02 00 00 A0 30 0F EC 12 02 00 00 
{265} normal block at 0x00000212EC0F4A60, 16 bytes long.
 Data: <&#224;G &#236;            > E0 47 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000212EC0F5460, 16 bytes long.
 Data: <&#184;G &#236;            > B8 47 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000212EC0F3640, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{262} normal block at 0x00000212EC0F5730, 16 bytes long.
 Data: < G &#236;            > 90 47 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000212EC0F2AA0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{260} normal block at 0x00000212EC0F52D0, 16 bytes long.
 Data: <&#216;F &#236;            > D8 46 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000212EC0F4C90, 16 bytes long.
 Data: <&#176;F &#236;            > B0 46 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000212EC0F56E0, 16 bytes long.
 Data: < F &#236;            > 88 46 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000212EC0F58C0, 16 bytes long.
 Data: <`F &#236;            > 60 46 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000212EC0F4B00, 16 bytes long.
 Data: <8F &#236;            > 38 46 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000212EC0EDF00, 16 bytes long.
 Data: < F &#236;            > 10 46 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000212EC0EE720, 16 bytes long.
 Data: < = &#236;            > 00 3D 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000212EC0F3D00, 40 bytes long.
 Data: < &#231; &#236;    &#240;&#134;&#239;&#237;    > 20 E7 0E EC 12 02 00 00 F0 86 EF ED 12 02 00 00 
{251} normal block at 0x00000212EC0ED8C0, 16 bytes long.
 Data: <&#240;E &#236;            > F0 45 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x00000212EC0EE450, 16 bytes long.
 Data: <&#200;E &#236;            > C8 45 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{249} normal block at 0x00000212EC0F2FE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{248} normal block at 0x00000212EC0EDE10, 16 bytes long.
 Data: <&#160;E &#236;            > A0 45 0F EC 12 02 00 00 00 00 00 00 00 00 00 00 
{247} normal block at 0x00000212EC0F45A0, 992 bytes long.
 Data: < &#222; &#236;    &#224;/ &#236;    > 10 DE 0E EC 12 02 00 00 E0 2F 0F EC 12 02 00 00 
{83} normal block at 0x00000212EC0DFAE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{82} normal block at 0x00000212EC0EE1D0, 16 bytes long.
 Data: < &#239; &#236;            > 20 EF 0D EC 12 02 00 00 00 00 00 00 00 00 00 00 
{81} normal block at 0x00000212EC0DEF20, 40 bytes long.
 Data: <&#208;&#225; &#236;    &#224;&#250; &#236;    > D0 E1 0E EC 12 02 00 00 E0 FA 0D EC 12 02 00 00 
{60} normal block at 0x00000212EC0EDD70, 16 bytes long.
 Data: < &#234;00&#247;           > 80 EA 30 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000212EC0ED9B0, 16 bytes long.
 Data: <@&#233;00&#247;           > 40 E9 30 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000212EC0EE540, 16 bytes long.
 Data: <&#248;W-0&#247;           > F8 57 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000212EC0EDC80, 16 bytes long.
 Data: <&#216;W-0&#247;           > D8 57 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000212EC0EE680, 16 bytes long.
 Data: <P -0&#247;           > 50 04 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x00000212EC0EE360, 16 bytes long.
 Data: <0 -0&#247;           > 30 04 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x00000212EC0EE630, 16 bytes long.
 Data: <&#224; -0&#247;           > E0 02 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x00000212EC0EE590, 16 bytes long.
 Data: <  -0&#247;           > 10 04 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x00000212EC0EE310, 16 bytes long.
 Data: <p -0&#247;           > 70 04 2D 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
{51} normal block at 0x00000212EC0EE2C0, 16 bytes long.
 Data: < &#192;+0&#247;           > 18 C0 2B 30 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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