Task 38682618

Name test_363-GPUGRID_TEST_ATM_40STEP_20261023-24-40-RND1539_0
Workunit 31624221
Created 27 Oct 2026, 8:25:17 UTC
Sent 27 Oct 2026, 8:25:25 UTC
Report deadline 1 Nov 2026, 8:25:25 UTC
Received 27 Oct 2026, 10:34:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 627984
Run time 36 min 41 sec
CPU time 36 min 41 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 14,104.10 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 724.04 MB
Peak swap size 14.34 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
11:56:27 (19816): wrapper (7.9.26016): starting
11:56:27 (19816): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:56:29 (19816): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:56:29 (19816): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\21\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\21\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:34:16 (19816): C:/Windows/system32/cmd.exe exited; CPU time 2201.796875
12:34:16 (19816): called boinc_finish(0)
0 bytes in 0 Free Blocks.
616 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 52887139 bytes.
Dumping objects ->
{3835234} normal block at 0x000002528F1E12F0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835223} normal block at 0x000002528F1E10C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835212} normal block at 0x000002528F1E1210, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835201} normal block at 0x000002528F1E13D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835190} normal block at 0x000002528F1E1C20, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835159} normal block at 0x000002528F2D30A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835148} normal block at 0x000002528F330D80, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835145} normal block at 0x000002528D3F7620, 8 bytes long.
 Data: <  7&#141;R   > 00 00 37 8D 52 02 00 00 
{3834543} normal block at 0x000002528F3308D0, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833943} normal block at 0x000002528D3F75D0, 8 bytes long.
 Data: <&#144; 3&#143;R   > 90 1A 33 8F 52 02 00 00 
..\zip\boinc_zip.cpp(122) : {303} normal block at 0x000002528D401060, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002528D3EB4D0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{287} normal block at 0x000002528D402EB0, 16 bytes long.
 Data: <&#168;B@&#141;R           > A8 42 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002528D402E60, 16 bytes long.
 Data: <&#128;B@&#141;R           > 80 42 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002528D3FD590, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{284} normal block at 0x000002528D402DC0, 16 bytes long.
 Data: <XB@&#141;R           > 58 42 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002528D402140, 16 bytes long.
 Data: <0B@&#141;R           > 30 42 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002528D402CD0, 16 bytes long.
 Data: < B@&#141;R           > 08 42 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002528D402370, 16 bytes long.
 Data: <&#224;A@&#141;R           > E0 41 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002528D3FBE20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{279} normal block at 0x000002528D402D70, 16 bytes long.
 Data: <&#200;&#187;>&#141;R           > C8 BB 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002528D3FD290, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{277} normal block at 0x000002528D402B40, 16 bytes long.
 Data: <&#160;&#187;>&#141;R           > A0 BB 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002528D4028C0, 16 bytes long.
 Data: <x&#187;>&#141;R           > 78 BB 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002528D402B90, 16 bytes long.
 Data: <P&#187;>&#141;R           > 50 BB 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002528D402C80, 16 bytes long.
 Data: <(&#187;>&#141;R           > 28 BB 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002528D4027D0, 16 bytes long.
 Data: < &#187;>&#141;R           > 00 BB 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002528D402AF0, 16 bytes long.
 Data: <&#216;&#186;>&#141;R           > D8 BA 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002528D3FCF90, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{269} normal block at 0x000002528D402AA0, 16 bytes long.
 Data: <&#176;&#186;>&#141;R           > B0 BA 3E 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002528D3EBAB0, 320 bytes long.
 Data: <&#160;*@&#141;R   &#144;&#207;?&#141;R   > A0 2A 40 8D 52 02 00 00 90 CF 3F 8D 52 02 00 00 
{267} normal block at 0x000002528D4024B0, 16 bytes long.
 Data: <&#192;A@&#141;R           > C0 41 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002528D402690, 16 bytes long.
 Data: < A@&#141;R           > 98 41 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002528D3FD530, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{264} normal block at 0x000002528D4025F0, 16 bytes long.
 Data: <pA@&#141;R           > 70 41 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002528D3FD170, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{262} normal block at 0x000002528D402A50, 16 bytes long.
 Data: <&#184;@@&#141;R           > B8 40 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002528D4025A0, 16 bytes long.
 Data: <&#144;@@&#141;R           > 90 40 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002528D402E10, 16 bytes long.
 Data: <h@@&#141;R           > 68 40 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002528D402280, 16 bytes long.
 Data: <@@@&#141;R           > 40 40 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002528D402780, 16 bytes long.
 Data: < @@&#141;R           > 18 40 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002528D4029B0, 16 bytes long.
 Data: <&#240;?@&#141;R           > F0 3F 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002528D402D20, 16 bytes long.
 Data: <&#160;&#186;?&#141;R           > A0 BA 3F 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000002528D3FBAA0, 40 bytes long.
 Data: < -@&#141;R   &#160;0-&#143;R   > 20 2D 40 8D 52 02 00 00 A0 30 2D 8F 52 02 00 00 
{253} normal block at 0x000002528D402C30, 16 bytes long.
 Data: <&#208;?@&#141;R           > D0 3F 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002528D402960, 16 bytes long.
 Data: <&#168;?@&#141;R           > A8 3F 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000002528D3FD950, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{250} normal block at 0x000002528D402BE0, 16 bytes long.
 Data: <&#128;?@&#141;R           > 80 3F 40 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{249} normal block at 0x000002528D403F80, 992 bytes long.
 Data: <&#224;+@&#141;R   P&#217;?&#141;R   > E0 2B 40 8D 52 02 00 00 50 D9 3F 8D 52 02 00 00 
{85} normal block at 0x000002528D3FD830, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{84} normal block at 0x000002528D3F7760, 16 bytes long.
 Data: <&#128;&#187;?&#141;R           > 80 BB 3F 8D 52 02 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x000002528D3FBB80, 40 bytes long.
 Data: <`w?&#141;R   0&#216;?&#141;R   > 60 77 3F 8D 52 02 00 00 30 D8 3F 8D 52 02 00 00 
{62} normal block at 0x000002528D3F7260, 16 bytes long.
 Data: <&#128;&#234;&#210;~&#246;           > 80 EA D2 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002528D3F6D60, 16 bytes long.
 Data: <@&#233;&#210;~&#246;           > 40 E9 D2 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002528D3F7990, 16 bytes long.
 Data: <&#248;W&#207;~&#246;           > F8 57 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002528D3F7580, 16 bytes long.
 Data: <&#216;W&#207;~&#246;           > D8 57 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002528D3F71C0, 16 bytes long.
 Data: <P &#207;~&#246;           > 50 04 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002528D3F73A0, 16 bytes long.
 Data: <0 &#207;~&#246;           > 30 04 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002528D3F7440, 16 bytes long.
 Data: <&#224; &#207;~&#246;           > E0 02 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002528D3F6FE0, 16 bytes long.
 Data: <  &#207;~&#246;           > 10 04 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002528D3F74E0, 16 bytes long.
 Data: <p &#207;~&#246;           > 70 04 CF 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000002528D3F6F90, 16 bytes long.
 Data: < &#192;&#205;~&#246;           > 18 C0 CD 7E F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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