Task 38682064

Name test_865-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND3949_0
Workunit 31623699
Created 27 Oct 2026, 6:26:06 UTC
Sent 27 Oct 2026, 6:26:11 UTC
Report deadline 1 Nov 2026, 6:26:11 UTC
Received 27 Oct 2026, 7:46:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 641350
Run time 29 min 21 sec
CPU time 27 min 31 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 19,410.98 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 725.00 MB
Peak swap size 5.38 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
08:17:57 (2220): wrapper (7.9.26016): starting
08:17:57 (2220): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
08:17:58 (2220): Library/usr/bin/tar.exe exited; CPU time 0.015625
08:17:58 (2220): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:46:14 (2220): C:/Windows/system32/cmd.exe exited; CPU time 1651.156250
08:46:14 (2220): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 25031231 bytes.
Dumping objects ->
{3835240} normal block at 0x0000029546065530, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x0000029546065610, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x00000295460654C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835207} normal block at 0x0000029546065450, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835196} normal block at 0x00000295460653E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835165} normal block at 0x0000029547C95D40, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x0000029547CAF7E0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835151} normal block at 0x000002954605DCB0, 8 bytes long.
 Data: <  @F&#149;   > 00 00 40 46 95 02 00 00 
{3834545} normal block at 0x0000029547CAEFA0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000002954605E700, 8 bytes long.
 Data: <&#240;L F&#149;   > F0 4C 06 46 95 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000029546061F60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000029546056D90, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000295460661F0, 16 bytes long.
 Data: < q F&#149;           > 18 71 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000029546066D30, 16 bytes long.
 Data: <&#240;p F&#149;           > F0 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002954605FBB0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000029546066CE0, 16 bytes long.
 Data: <&#200;p F&#149;           > C8 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000029546066420, 16 bytes long.
 Data: <&#160;p F&#149;           > A0 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000029546065ED0, 16 bytes long.
 Data: <xp F&#149;           > 78 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000029546065E80, 16 bytes long.
 Data: <Pp F&#149;           > 50 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000029546065290, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x0000029546066C90, 16 bytes long.
 Data: <X&#249; F&#149;           > 58 F9 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000029546060150, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000029546066510, 16 bytes long.
 Data: <0&#249; F&#149;           > 30 F9 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000029546066A60, 16 bytes long.
 Data: < &#249; F&#149;           > 08 F9 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000295460661A0, 16 bytes long.
 Data: <&#224;&#248; F&#149;           > E0 F8 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000029546066650, 16 bytes long.
 Data: <&#184;&#248; F&#149;           > B8 F8 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000029546066100, 16 bytes long.
 Data: < &#248; F&#149;           > 90 F8 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000029546066880, 16 bytes long.
 Data: <h&#248; F&#149;           > 68 F8 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002954605F8B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000295460669C0, 16 bytes long.
 Data: <@&#248; F&#149;           > 40 F8 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002954604F840, 320 bytes long.
 Data: <&#192;i F&#149;   &#176;&#248; F&#149;   > C0 69 06 46 95 02 00 00 B0 F8 05 46 95 02 00 00 
{276} normal block at 0x0000029546066600, 16 bytes long.
 Data: <0p F&#149;           > 30 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000029546066D80, 16 bytes long.
 Data: < p F&#149;           > 08 70 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002954605F9D0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000029546066C40, 16 bytes long.
 Data: <&#224;o F&#149;           > E0 6F 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002954605F790, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000029546065E30, 16 bytes long.
 Data: <(o F&#149;           > 28 6F 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000295460665B0, 16 bytes long.
 Data: < o F&#149;           > 00 6F 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000029546066BF0, 16 bytes long.
 Data: <&#216;n F&#149;           > D8 6E 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000029546066830, 16 bytes long.
 Data: <&#176;n F&#149;           > B0 6E 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000295460663D0, 16 bytes long.
 Data: < n F&#149;           > 88 6E 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000029546066AB0, 16 bytes long.
 Data: <`n F&#149;           > 60 6E 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000029546066B00, 16 bytes long.
 Data: <@X F&#149;           > 40 58 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000029546065840, 40 bytes long.
 Data: < k F&#149;   @]&#201;G&#149;   > 00 6B 06 46 95 02 00 00 40 5D C9 47 95 02 00 00 
{262} normal block at 0x0000029546066BA0, 16 bytes long.
 Data: <@n F&#149;           > 40 6E 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000029546066010, 16 bytes long.
 Data: < n F&#149;           > 18 6E 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002954605FF70, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000029546066B50, 16 bytes long.
 Data: <&#240;m F&#149;           > F0 6D 06 46 95 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000029546066DF0, 992 bytes long.
 Data: <Pk F&#149;   p&#255; F&#149;   > 50 6B 06 46 95 02 00 00 70 FF 05 46 95 02 00 00 
{94} normal block at 0x000002954605FDF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000002954605E750, 16 bytes long.
 Data: <&#208;&#244; F&#149;           > D0 F4 04 46 95 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000002954604F4D0, 40 bytes long.
 Data: <P&#231; F&#149;   &#240;&#253; F&#149;   > 50 E7 05 46 95 02 00 00 F0 FD 05 46 95 02 00 00 
{71} normal block at 0x000002954605E2A0, 16 bytes long.
 Data: < &#234;&#185; &#246;           > 80 EA B9 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002954605E0C0, 16 bytes long.
 Data: <@&#233;&#185; &#246;           > 40 E9 B9 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002954605E6B0, 16 bytes long.
 Data: <&#248;W&#182; &#246;           > F8 57 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002954605E5C0, 16 bytes long.
 Data: <&#216;W&#182; &#246;           > D8 57 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002954605DFD0, 16 bytes long.
 Data: <P &#182; &#246;           > 50 04 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002954605DD50, 16 bytes long.
 Data: <0 &#182; &#246;           > 30 04 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002954605E570, 16 bytes long.
 Data: <&#224; &#182; &#246;           > E0 02 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002954605DDA0, 16 bytes long.
 Data: <  &#182; &#246;           > 10 04 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002954605E480, 16 bytes long.
 Data: <p &#182; &#246;           > 70 04 B6 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002954605E430, 16 bytes long.
 Data: < &#192;&#180; &#246;           > 18 C0 B4 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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