Task 38681961

Name test_34-GPUGRID_TEST_ATM_40STEP_20261023-17-40-RND9539_0
Workunit 31623601
Created 27 Oct 2026, 6:00:26 UTC
Sent 27 Oct 2026, 6:00:33 UTC
Report deadline 1 Nov 2026, 6:00:33 UTC
Received 27 Oct 2026, 6:37:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652906
Run time 35 min 28 sec
CPU time 34 min 16 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,394.34 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 728.66 MB
Peak swap size 8.37 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
02:01:41 (20916): wrapper (7.9.26016): starting
02:01:41 (20916): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:01:42 (20916): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:01:42 (20916): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:36:48 (20916): C:/Windows/system32/cmd.exe exited; CPU time 2056.046875
02:36:48 (20916): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 47549021 bytes.
Dumping objects ->
{3835247} normal block at 0x00000167DCE00650, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835236} normal block at 0x00000167DCDFFBD0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835225} normal block at 0x00000167DCE005E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835214} normal block at 0x00000167DCE00960, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835203} normal block at 0x00000167DCDFFAF0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835172} normal block at 0x00000167DCDF20E0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835159} normal block at 0x00000167DCDF05F0, 8 bytes long.
 Data: <  &#204;&#220;g   > 00 00 CC DC 67 01 00 00 
{3833953} normal block at 0x00000167DCDF0550, 8 bytes long.
 Data: <P&#215; &#223;g   > 50 D7 17 DF 67 01 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x00000167DCE015D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000167DCDE6A60, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{292} normal block at 0x00000167DCDFF5A0, 16 bytes long.
 Data: <8&#249;&#223;&#220;g           > 38 F9 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000167DCDFEE20, 16 bytes long.
 Data: < &#249;&#223;&#220;g           > 10 F9 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000167DCDF8850, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{289} normal block at 0x00000167DCDFECE0, 16 bytes long.
 Data: <&#232;&#248;&#223;&#220;g           > E8 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000167DCDFED30, 16 bytes long.
 Data: <&#192;&#248;&#223;&#220;g           > C0 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000167DCDFF3C0, 16 bytes long.
 Data: < &#248;&#223;&#220;g           > 98 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000167DCDFE970, 16 bytes long.
 Data: <p&#248;&#223;&#220;g           > 70 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000167DCE00340, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{284} normal block at 0x00000167DCDFF1E0, 16 bytes long.
 Data: <h1&#223;&#220;g           > 68 31 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000167DCDF8730, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{282} normal block at 0x00000167DCDFEC90, 16 bytes long.
 Data: <@1&#223;&#220;g           > 40 31 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000167DCDFEC40, 16 bytes long.
 Data: < 1&#223;&#220;g           > 18 31 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000167DCDFF0F0, 16 bytes long.
 Data: <&#240;0&#223;&#220;g           > F0 30 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000167DCDFF190, 16 bytes long.
 Data: <&#200;0&#223;&#220;g           > C8 30 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000167DCDFEB00, 16 bytes long.
 Data: <&#160;0&#223;&#220;g           > A0 30 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000167DCDFEF10, 16 bytes long.
 Data: <x0&#223;&#220;g           > 78 30 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000167DCDF8AF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{274} normal block at 0x00000167DCDFF050, 16 bytes long.
 Data: <P0&#223;&#220;g           > 50 30 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000167DCDF3050, 320 bytes long.
 Data: <P&#240;&#223;&#220;g   &#240;&#138;&#223;&#220;g   > 50 F0 DF DC 67 01 00 00 F0 8A DF DC 67 01 00 00 
{272} normal block at 0x00000167DCDFEA60, 16 bytes long.
 Data: <P&#248;&#223;&#220;g           > 50 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000167DCDFEEC0, 16 bytes long.
 Data: <(&#248;&#223;&#220;g           > 28 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000167DCDF8A90, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{269} normal block at 0x00000167DCDFF140, 16 bytes long.
 Data: < &#248;&#223;&#220;g           > 00 F8 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000167DCDF87F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{267} normal block at 0x00000167DCDFEBF0, 16 bytes long.
 Data: <H&#247;&#223;&#220;g           > 48 F7 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000167DCDFF230, 16 bytes long.
 Data: < &#247;&#223;&#220;g           > 20 F7 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000167DCDFF0A0, 16 bytes long.
 Data: <&#248;&#246;&#223;&#220;g           > F8 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000167DCDFF000, 16 bytes long.
 Data: <&#208;&#246;&#223;&#220;g           > D0 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000167DCDFEBA0, 16 bytes long.
 Data: <&#168;&#246;&#223;&#220;g           > A8 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000167DCDFEA10, 16 bytes long.
 Data: < &#246;&#223;&#220;g           > 80 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000167DCDFEE70, 16 bytes long.
 Data: <p &#224;&#220;g           > 70 05 E0 DC 67 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000167DCE00570, 40 bytes long.
 Data: <p&#238;&#223;&#220;g   &#224; &#223;&#220;g   > 70 EE DF DC 67 01 00 00 E0 20 DF DC 67 01 00 00 
{258} normal block at 0x00000167DCDFF370, 16 bytes long.
 Data: <`&#246;&#223;&#220;g           > 60 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000167DCDFF320, 16 bytes long.
 Data: <8&#246;&#223;&#220;g           > 38 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000167DCDF9570, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{255} normal block at 0x00000167DCDFE9C0, 16 bytes long.
 Data: < &#246;&#223;&#220;g           > 10 F6 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000167DCDFF610, 992 bytes long.
 Data: <&#192;&#233;&#223;&#220;g   p&#149;&#223;&#220;g   > C0 E9 DF DC 67 01 00 00 70 95 DF DC 67 01 00 00 
{90} normal block at 0x00000167DCDF8C10, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{89} normal block at 0x00000167DCDF0000, 16 bytes long.
 Data: <p &#223;&#220;g           > 70 10 DF DC 67 01 00 00 00 00 00 00 00 00 00 00 
{88} normal block at 0x00000167DCDF1070, 40 bytes long.
 Data: <  &#223;&#220;g    &#140;&#223;&#220;g   > 00 00 DF DC 67 01 00 00 10 8C DF DC 67 01 00 00 
{67} normal block at 0x00000167DCDF09B0, 16 bytes long.
 Data: < &#234;&#169;&#146;&#247;           > 80 EA A9 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000167DCDF0460, 16 bytes long.
 Data: <@&#233;&#169;&#146;&#247;           > 40 E9 A9 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000167DCDF0730, 16 bytes long.
 Data: <&#248;W&#166;&#146;&#247;           > F8 57 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000167DCDEFE20, 16 bytes long.
 Data: <&#216;W&#166;&#146;&#247;           > D8 57 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000167DCDF0370, 16 bytes long.
 Data: <P &#166;&#146;&#247;           > 50 04 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000167DCDF0320, 16 bytes long.
 Data: <0 &#166;&#146;&#247;           > 30 04 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000167DCDEFFB0, 16 bytes long.
 Data: <&#224; &#166;&#146;&#247;           > E0 02 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000167DCDF02D0, 16 bytes long.
 Data: <  &#166;&#146;&#247;           > 10 04 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000167DCDF08C0, 16 bytes long.
 Data: <p &#166;&#146;&#247;           > 70 04 A6 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000167DCDF0640, 16 bytes long.
 Data: < &#192;&#164;&#146;&#247;           > 18 C0 A4 92 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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