Task 38681737

Name test_363-GPUGRID_TEST_ATM_40STEP_20261023-20-40-RND1539_0
Workunit 31623390
Created 27 Oct 2026, 5:10:00 UTC
Sent 27 Oct 2026, 5:10:03 UTC
Report deadline 1 Nov 2026, 5:10:03 UTC
Received 27 Oct 2026, 6:31:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 625378
Run time 1 hours 20 min 41 sec
CPU time 1 hours 12 min 34 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 14,564.90 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 744.68 MB
Peak swap size 12.91 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
23:13:53 (28524): wrapper (7.9.26016): starting
23:13:53 (28524): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
23:13:54 (28524): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:13:54 (28524): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:31:11 (28524): C:/Windows/system32/cmd.exe exited; CPU time 4354.859375
00:31:11 (28524): called boinc_finish(0)
0 bytes in 0 Free Blocks.
496 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 83863281 bytes.
Dumping objects ->
{3835871} normal block at 0x0000016ECD7CF250, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835860} normal block at 0x0000016ECBA66C00, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835849} normal block at 0x0000016ECBA669D0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835838} normal block at 0x0000016ECBA66960, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835827} normal block at 0x0000016ECBA668F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835796} normal block at 0x0000016ECD817E50, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835785} normal block at 0x0000016ECBA8C890, 120 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835782} normal block at 0x0000016ECBA5F870, 8 bytes long.
 Data: <  &#163;&#203;n   > 00 00 A3 CB 6E 01 00 00 
{3834849} normal block at 0x0000016ECBA8C290, 120 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833971} normal block at 0x0000016ECBA5ECE0, 8 bytes long.
 Data: < U&#135;&#205;n   > 00 55 87 CD 6E 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x0000016ECBA639F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000016ECBA58020, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x0000016ECBA67EB0, 16 bytes long.
 Data: <&#200;&#134;&#166;&#203;n           > C8 86 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000016ECBA675F0, 16 bytes long.
 Data: <&#160;&#134;&#166;&#203;n           > A0 86 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000016ECBA61A00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x0000016ECBA67C30, 16 bytes long.
 Data: <x&#134;&#166;&#203;n           > 78 86 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000016ECBA67870, 16 bytes long.
 Data: <P&#134;&#166;&#203;n           > 50 86 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000016ECBA67460, 16 bytes long.
 Data: <(&#134;&#166;&#203;n           > 28 86 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000016ECBA67B90, 16 bytes long.
 Data: < &#134;&#166;&#203;n           > 00 86 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000016ECBA66B90, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x0000016ECBA67BE0, 16 bytes long.
 Data: <&#184; &#166;&#203;n           > B8 0A A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000016ECBA61C40, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x0000016ECBA67960, 16 bytes long.
 Data: <  &#166;&#203;n           > 90 0A A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000016ECBA67FA0, 16 bytes long.
 Data: <h &#166;&#203;n           > 68 0A A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000016ECBA67DC0, 16 bytes long.
 Data: <@ &#166;&#203;n           > 40 0A A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000016ECBA67690, 16 bytes long.
 Data: <  &#166;&#203;n           > 18 0A A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000016ECBA67CD0, 16 bytes long.
 Data: <&#240;	&#166;&#203;n           > F0 09 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000016ECBA67B40, 16 bytes long.
 Data: <&#200;	&#166;&#203;n           > C8 09 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000016ECBA618E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x0000016ECBA67910, 16 bytes long.
 Data: <&#160;	&#166;&#203;n           > A0 09 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000016ECBA609A0, 320 bytes long.
 Data: < y&#166;&#203;n   &#224; &#166;&#203;n   > 10 79 A6 CB 6E 01 00 00 E0 18 A6 CB 6E 01 00 00 
{281} normal block at 0x0000016ECBA67370, 16 bytes long.
 Data: <&#224;&#133;&#166;&#203;n           > E0 85 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000016ECBA67280, 16 bytes long.
 Data: <&#184;&#133;&#166;&#203;n           > B8 85 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000016ECBA61820, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x0000016ECBA67A50, 16 bytes long.
 Data: < &#133;&#166;&#203;n           > 90 85 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000016ECBA61580, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x0000016ECBA678C0, 16 bytes long.
 Data: <&#216;&#132;&#166;&#203;n           > D8 84 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000016ECBA67D70, 16 bytes long.
 Data: <&#176;&#132;&#166;&#203;n           > B0 84 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000016ECBA67C80, 16 bytes long.
 Data: < &#132;&#166;&#203;n           > 88 84 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000016ECBA67F00, 16 bytes long.
 Data: <`&#132;&#166;&#203;n           > 60 84 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000016ECBA67230, 16 bytes long.
 Data: <8&#132;&#166;&#203;n           > 38 84 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000016ECBA67AF0, 16 bytes long.
 Data: < &#132;&#166;&#203;n           > 10 84 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000016ECBA67E60, 16 bytes long.
 Data: <Pm&#166;&#203;n           > 50 6D A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000016ECBA66D50, 40 bytes long.
 Data: <`~&#166;&#203;n   P~ &#205;n   > 60 7E A6 CB 6E 01 00 00 50 7E 81 CD 6E 01 00 00 
{267} normal block at 0x0000016ECBA68090, 16 bytes long.
 Data: <&#240;&#131;&#166;&#203;n           > F0 83 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000016ECBA67AA0, 16 bytes long.
 Data: <&#200;&#131;&#166;&#203;n           > C8 83 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000016ECBA61880, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x0000016ECBA67640, 16 bytes long.
 Data: <&#160;&#131;&#166;&#203;n           > A0 83 A6 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000016ECBA683A0, 992 bytes long.
 Data: <@v&#166;&#203;n     &#166;&#203;n   > 40 76 A6 CB 6E 01 00 00 80 18 A6 CB 6E 01 00 00 
{99} normal block at 0x0000016ECBA61520, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x0000016ECBA5EF10, 16 bytes long.
 Data: < &#207;&#164;&#203;n           > 20 CF A4 CB 6E 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x0000016ECBA4CF20, 40 bytes long.
 Data: < &#239;&#165;&#203;n     &#166;&#203;n   > 10 EF A5 CB 6E 01 00 00 20 15 A6 CB 6E 01 00 00 
{76} normal block at 0x0000016ECBA5F7D0, 16 bytes long.
 Data: < &#234;&#135;>&#247;           > 80 EA 87 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x0000016ECBA5F4B0, 16 bytes long.
 Data: <@&#233;&#135;>&#247;           > 40 E9 87 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000016ECBA5F730, 16 bytes long.
 Data: <&#248;W&#132;>&#247;           > F8 57 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000016ECBA5F000, 16 bytes long.
 Data: <&#216;W&#132;>&#247;           > D8 57 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000016ECBA5F0F0, 16 bytes long.
 Data: <P &#132;>&#247;           > 50 04 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000016ECBA5EDD0, 16 bytes long.
 Data: <0 &#132;>&#247;           > 30 04 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000016ECBA5F190, 16 bytes long.
 Data: <&#224; &#132;>&#247;           > E0 02 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000016ECBA5EFB0, 16 bytes long.
 Data: <  &#132;>&#247;           > 10 04 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000016ECBA5F0A0, 16 bytes long.
 Data: <p &#132;>&#247;           > 70 04 84 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000016ECBA5EF60, 16 bytes long.
 Data: < &#192;&#130;>&#247;           > 18 C0 82 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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