Task 38681685

Name test_967-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND6457_0
Workunit 31623341
Created 27 Oct 2026, 4:57:29 UTC
Sent 27 Oct 2026, 4:57:35 UTC
Report deadline 1 Nov 2026, 4:57:35 UTC
Received 27 Oct 2026, 6:09:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 651312
Run time 17 min 13 sec
CPU time 15 min 55 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 56,279.60 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 735.63 MB
Peak swap size 10.02 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:52:01 (3372): wrapper (7.9.26016): starting
00:52:01 (3372): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:52:02 (3372): Library/usr/bin/tar.exe exited; CPU time 0.000000
00:52:02 (3372): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:08:58 (3372): C:/Windows/system32/cmd.exe exited; CPU time 955.406250
01:08:58 (3372): called boinc_finish(0)
0 bytes in 0 Free Blocks.
526 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 21904195 bytes.
Dumping objects ->
{3835289} normal block at 0x0000024864AE5A70, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835278} normal block at 0x0000024864AE5DF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835267} normal block at 0x0000024864AE5D10, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835256} normal block at 0x0000024864AE5A00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835245} normal block at 0x0000024864AE5CA0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835214} normal block at 0x00000248668188F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835203} normal block at 0x0000024864B3DFD0, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835200} normal block at 0x0000024864AE07B0, 8 bytes long.
 Data: <  &#236;dH   > 00 00 EC 64 48 02 00 00 
{3834577} normal block at 0x0000024864B3DBC0, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x0000024864AE12F0, 8 bytes long.
 Data: <&#224;&#225;&#187;dH   > E0 E1 BB 64 48 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x0000024864AE1C20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000024864AD6B70, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000024864AE6940, 16 bytes long.
 Data: <&#216;d&#174;dH           > D8 64 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000024864AE7570, 16 bytes long.
 Data: <&#176;d&#174;dH           > B0 64 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000024864ADFDE0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000024864AE68F0, 16 bytes long.
 Data: < d&#174;dH           > 88 64 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000024864AE6F80, 16 bytes long.
 Data: <`d&#174;dH           > 60 64 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000024864AE6F30, 16 bytes long.
 Data: <8d&#174;dH           > 38 64 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000024864AE6850, 16 bytes long.
 Data: < d&#174;dH           > 10 64 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000024864AE5BC0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000024864AE6A80, 16 bytes long.
 Data: <h&#158;&#173;dH           > 68 9E AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000024864ADFD20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000024864AE6DF0, 16 bytes long.
 Data: <@&#158;&#173;dH           > 40 9E AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000024864AE6AD0, 16 bytes long.
 Data: < &#158;&#173;dH           > 18 9E AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000024864AE7070, 16 bytes long.
 Data: <&#240; &#173;dH           > F0 9D AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000024864AE74D0, 16 bytes long.
 Data: <&#200; &#173;dH           > C8 9D AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000024864AE6E90, 16 bytes long.
 Data: <&#160; &#173;dH           > A0 9D AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000024864AE6BC0, 16 bytes long.
 Data: <x &#173;dH           > 78 9D AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000024864ADF6C0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000024864AE6800, 16 bytes long.
 Data: <P &#173;dH           > 50 9D AD 64 48 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000024864AD9D50, 320 bytes long.
 Data: < h&#174;dH   &#192;&#246;&#173;dH   > 00 68 AE 64 48 02 00 00 C0 F6 AD 64 48 02 00 00 
{273} normal block at 0x0000024864AE7020, 16 bytes long.
 Data: <&#240;c&#174;dH           > F0 63 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000024864AE72F0, 16 bytes long.
 Data: <&#200;c&#174;dH           > C8 63 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000024864ADFB40, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000024864AE67B0, 16 bytes long.
 Data: <&#160;c&#174;dH           > A0 63 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000024864ADF660, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000024864AE6EE0, 16 bytes long.
 Data: <&#232;b&#174;dH           > E8 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000024864AE6760, 16 bytes long.
 Data: <&#192;b&#174;dH           > C0 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000024864AE7110, 16 bytes long.
 Data: < b&#174;dH           > 98 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000024864AE7430, 16 bytes long.
 Data: <pb&#174;dH           > 70 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000024864AE0AD0, 16 bytes long.
 Data: <Hb&#174;dH           > 48 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000024864AE0D00, 16 bytes long.
 Data: < b&#174;dH           > 20 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000024864AE0A80, 16 bytes long.
 Data: < Y&#174;dH           > 20 59 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000024864AE5920, 40 bytes long.
 Data: <  &#174;dH   &#240;  fH   > 80 0A AE 64 48 02 00 00 F0 88 81 66 48 02 00 00 
{259} normal block at 0x0000024864AE06C0, 16 bytes long.
 Data: < b&#174;dH           > 00 62 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000024864AE0670, 16 bytes long.
 Data: <&#216;a&#174;dH           > D8 61 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000024864ADF4E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000024864AE1390, 16 bytes long.
 Data: <&#176;a&#174;dH           > B0 61 AE 64 48 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000024864AE61B0, 992 bytes long.
 Data: <  &#174;dH   &#224;&#244;&#173;dH   > 90 13 AE 64 48 02 00 00 E0 F4 AD 64 48 02 00 00 
{91} normal block at 0x0000024864ADFF60, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000024864AE0800, 16 bytes long.
 Data: <p&#216;&#172;dH           > 70 D8 AC 64 48 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000024864ACD870, 40 bytes long.
 Data: <  &#174;dH   `&#255;&#173;dH   > 00 08 AE 64 48 02 00 00 60 FF AD 64 48 02 00 00 
{68} normal block at 0x0000024864AE0850, 16 bytes long.
 Data: < &#234;&#140; &#247;           > 80 EA 8C 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000024864AE0FD0, 16 bytes long.
 Data: <@&#233;&#140; &#247;           > 40 E9 8C 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000024864AE12A0, 16 bytes long.
 Data: <&#248;W&#137; &#247;           > F8 57 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000024864AE0760, 16 bytes long.
 Data: <&#216;W&#137; &#247;           > D8 57 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000024864AE0F80, 16 bytes long.
 Data: <P &#137; &#247;           > 50 04 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000024864AE1160, 16 bytes long.
 Data: <0 &#137; &#247;           > 30 04 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000024864AE0710, 16 bytes long.
 Data: <&#224; &#137; &#247;           > E0 02 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000024864AE0530, 16 bytes long.
 Data: <  &#137; &#247;           > 10 04 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000024864AE0F30, 16 bytes long.
 Data: <p &#137; &#247;           > 70 04 89 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000024864AE0B70, 16 bytes long.
 Data: < &#192;&#135; &#247;           > 18 C0 87 81 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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