Task 38681467
| Name | test_617-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND6683_0 |
| Workunit | 31623131 |
| Created | 27 Oct 2026, 4:06:36 UTC |
| Sent | 27 Oct 2026, 4:06:37 UTC |
| Report deadline | 1 Nov 2026, 4:06:37 UTC |
| Received | 27 Oct 2026, 15:00:41 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 623034 |
| Run time | 22 min 49 sec |
| CPU time | 20 min 52 sec |
| Validate state | Valid |
| Credit | 60,000.00 |
| Device peak FLOPS | 44,609.07 GFLOPS |
| Application version | ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121) windows_x86_64 |
| Peak working set size | 713.74 MB |
| Peak swap size | 9.97 GB |
| Peak disk usage | 3.03 GB |
Stderr output
<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:26:50 (23304): wrapper (7.9.26016): starting
07:26:50 (23304): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:26:51 (23304): Library/usr/bin/tar.exe exited; CPU time 0.015625
07:26:51 (23304): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835117} normal block at 0x000001A60C68F490, 8 bytes long.
Data: < d > 00 00 64 0C A6 01 00 00
..\lib\diagnostics_win.cpp(417) : {3833968} normal block at 0x000001A60E3758A0, 1080 bytes long.
Data: < 5 P > 98 35 00 00 CD CD CD CD 50 01 00 00 00 00 00 00
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x000001A60C6913C0, 260 bytes long.
Data: < > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
Object dump complete.
09:31:19 (1160): wrapper (7.9.26016): starting
09:31:19 (1160): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\24\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1458} normal block at 0x00000267963859F0, 8 bytes long.
Data: < 3 g > 00 00 33 96 67 02 00 00
..\lib\diagnostics_win.cpp(417) : {309} normal block at 0x0000026796386510, 1080 bytes long.
Data: < D > B8 8D 00 00 CD CD CD CD 44 01 00 00 00 00 00 00
Object dump complete.
09:36:49 (2296): wrapper (7.9.26016): starting
09:36:49 (2296): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\24\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1458} normal block at 0x00000186DBEB4FA0, 8 bytes long.
Data: < 4 > 00 00 34 DC 86 01 00 00
..\lib\diagnostics_win.cpp(417) : {309} normal block at 0x00000186DBEB62E0, 1080 bytes long.
Data: < D > 8C 9C 00 00 CD CD CD CD 44 01 00 00 00 00 00 00
Object dump complete.
09:49:56 (39016): wrapper (7.9.26016): starting
09:49:56 (39016): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\24\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:00:20 (39016): C:/Windows/system32/cmd.exe exited; CPU time 573.343750
10:00:20 (39016): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 13523719 bytes.
Dumping objects ->
{1546} normal block at 0x0000026302D345B0, 48 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{1535} normal block at 0x0000026302D34B60, 48 bytes long.
Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{1524} normal block at 0x0000026302D348C0, 48 bytes long.
Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61
{1513} normal block at 0x0000026302D34540, 48 bytes long.
Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{1502} normal block at 0x0000026302D34C40, 48 bytes long.
Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61
{1471} normal block at 0x0000026302D1F470, 64 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
..\api\boinc_api.cpp(309) : {1458} normal block at 0x0000026302D35C90, 8 bytes long.
Data: < c > 00 00 CB 02 63 02 00 00
{310} normal block at 0x0000026302D35740, 8 bytes long.
Data: <0e c > 30 65 D3 02 63 02 00 00
{301} normal block at 0x0000026302D25970, 80 bytes long.
Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C
{300} normal block at 0x0000026302D35E20, 16 bytes long.
Data: <8d c > 38 64 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{299} normal block at 0x0000026302D35970, 16 bytes long.
Data: < d c > 10 64 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{298} normal block at 0x0000026302D2FAF0, 32 bytes long.
Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D
{297} normal block at 0x0000026302D35DD0, 16 bytes long.
Data: < c c > E8 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{296} normal block at 0x0000026302D354C0, 16 bytes long.
Data: < c c > C0 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{295} normal block at 0x0000026302D35C40, 16 bytes long.
Data: < c c > 98 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{294} normal block at 0x0000026302D35BF0, 16 bytes long.
Data: <pc c > 70 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{293} normal block at 0x0000026302D34BD0, 48 bytes long.
Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F
{292} normal block at 0x0000026302D35830, 16 bytes long.
Data: < c > C8 85 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{291} normal block at 0x0000026302D2FD30, 32 bytes long.
Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69
{290} normal block at 0x0000026302D35A60, 16 bytes long.
Data: < c > A0 85 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{288} normal block at 0x0000026302D36050, 16 bytes long.
Data: <x c > 78 85 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{287} normal block at 0x0000026302D35880, 16 bytes long.
Data: <P c > 50 85 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{286} normal block at 0x0000026302D35240, 16 bytes long.
Data: <( c > 28 85 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{285} normal block at 0x0000026302D358D0, 16 bytes long.
Data: < c > 00 85 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{284} normal block at 0x0000026302D35650, 16 bytes long.
Data: < c > D8 84 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{283} normal block at 0x0000026302D30390, 32 bytes long.
Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55
{282} normal block at 0x0000026302D35470, 16 bytes long.
Data: < c > B0 84 D2 02 63 02 00 00 00 00 00 00 00 00 00 00
{281} normal block at 0x0000026302D284B0, 320 bytes long.
Data: <pT c c > 70 54 D3 02 63 02 00 00 90 03 D3 02 63 02 00 00
{280} normal block at 0x0000026302D35600, 16 bytes long.
Data: <Pc c > 50 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{279} normal block at 0x0000026302D35790, 16 bytes long.
Data: <(c c > 28 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{278} normal block at 0x0000026302D2F8B0, 32 bytes long.
Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65
{277} normal block at 0x0000026302D35EC0, 16 bytes long.
Data: < c c > 00 63 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{276} normal block at 0x0000026302D2FF10, 32 bytes long.
Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62
{275} normal block at 0x0000026302D35150, 16 bytes long.
Data: <Hb c > 48 62 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{274} normal block at 0x0000026302D35380, 16 bytes long.
Data: < b c > 20 62 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{273} normal block at 0x0000026302D35B50, 16 bytes long.
Data: < a c > F8 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{272} normal block at 0x0000026302D356F0, 16 bytes long.
Data: < a c > D0 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{271} normal block at 0x0000026302D35B00, 16 bytes long.
Data: < a c > A8 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{270} normal block at 0x0000026302D35BA0, 16 bytes long.
Data: < a c > 80 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{268} normal block at 0x0000026302D352E0, 16 bytes long.
Data: < J c > F0 4A D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{267} normal block at 0x0000026302D34AF0, 40 bytes long.
Data: < R c p c > E0 52 D3 02 63 02 00 00 70 F4 D1 02 63 02 00 00
{266} normal block at 0x0000026302D35420, 16 bytes long.
Data: <`a c > 60 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{265} normal block at 0x0000026302D35F10, 16 bytes long.
Data: <8a c > 38 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{264} normal block at 0x0000026302D2FFD0, 32 bytes long.
Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F
{263} normal block at 0x0000026302D353D0, 16 bytes long.
Data: < a c > 10 61 D3 02 63 02 00 00 00 00 00 00 00 00 00 00
{262} normal block at 0x0000026302D36110, 992 bytes long.
Data: < S c c > D0 53 D3 02 63 02 00 00 D0 FF D2 02 63 02 00 00
{98} normal block at 0x0000026302D2F790, 32 bytes long.
Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F
{97} normal block at 0x0000026302D2E830, 16 bytes long.
Data: <0 c > 30 D4 D1 02 63 02 00 00 00 00 00 00 00 00 00 00
{96} normal block at 0x0000026302D1D430, 40 bytes long.
Data: <0 c c > 30 E8 D2 02 63 02 00 00 90 F7 D2 02 63 02 00 00
{75} normal block at 0x0000026302D2E6A0, 16 bytes long.
Data: < $# > 80 EA 24 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{74} normal block at 0x0000026302D2F3C0, 16 bytes long.
Data: <@ $# > 40 E9 24 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{73} normal block at 0x0000026302D2F460, 16 bytes long.
Data: < W!# > F8 57 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{72} normal block at 0x0000026302D2EA60, 16 bytes long.
Data: < W!# > D8 57 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{71} normal block at 0x0000026302D2F0F0, 16 bytes long.
Data: <P !# > 50 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{70} normal block at 0x0000026302D2EDD0, 16 bytes long.
Data: <0 !# > 30 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{69} normal block at 0x0000026302D2EF60, 16 bytes long.
Data: < !# > E0 02 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{68} normal block at 0x0000026302D2E9C0, 16 bytes long.
Data: < !# > 10 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{67} normal block at 0x0000026302D2F050, 16 bytes long.
Data: <p !# > 70 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00
{66} normal block at 0x0000026302D2E740, 16 bytes long.
Data: < # > 18 C0 1F 23 F7 7F 00 00 00 00 00 00 00 00 00 00
Object dump complete.
</stderr_txt>
]]>
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