Task 38681414

Name test_464-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND5424_0
Workunit 31623080
Created 27 Oct 2026, 3:52:23 UTC
Sent 27 Oct 2026, 3:52:34 UTC
Report deadline 1 Nov 2026, 3:52:34 UTC
Received 27 Oct 2026, 10:13:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654622
Run time 1 hours 18 min 28 sec
CPU time 53 min 8 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,353.06 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 706.11 MB
Peak swap size 6.85 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
16:14:17 (24604): wrapper (7.9.26016): starting
16:14:17 (24604): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:14:18 (24604): Library/usr/bin/tar.exe exited; CPU time 0.015625
16:14:18 (24604): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:30:51 (24604): C:/Windows/system32/cmd.exe exited; CPU time 3188.796875
17:30:51 (24604): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 99302725 bytes.
Dumping objects ->
{3835294} normal block at 0x0000018634577780, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835283} normal block at 0x00000186345774E0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835272} normal block at 0x00000186326E4DA0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835261} normal block at 0x00000186326E4E80, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835250} normal block at 0x00000186326E4B70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835219} normal block at 0x0000018634586DC0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835205} normal block at 0x00000186326E0960, 8 bytes long.
 Data: <   2    > 00 00 BB 32 86 01 00 00 
{3834057} normal block at 0x00000186326DFDD0, 8 bytes long.
 Data: < 4^4    > 90 34 5E 34 86 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x00000186326E1790, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000186326D6DC0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000186326E5E30, 16 bytes long.
 Data: < ln2            > 18 6C 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000186326E62E0, 16 bytes long.
 Data: < kn2            > F0 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000186326DF290, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000186326E6790, 16 bytes long.
 Data: < kn2            > C8 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000186326E63D0, 16 bytes long.
 Data: < kn2            > A0 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000186326E5D40, 16 bytes long.
 Data: <xkn2            > 78 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000186326E5ED0, 16 bytes long.
 Data: <Pkn2            > 50 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000186326E5040, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000186326E6560, 16 bytes long.
 Data: <H m2            > 48 93 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000186326DFA10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000186326E5CF0, 16 bytes long.
 Data: <  m2            > 20 93 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000186326E6290, 16 bytes long.
 Data: <  m2            > F8 92 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000186326E6600, 16 bytes long.
 Data: <  m2            > D0 92 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000186326E67E0, 16 bytes long.
 Data: <  m2            > A8 92 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000186326E6380, 16 bytes long.
 Data: <  m2            > 80 92 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000186326E6830, 16 bytes long.
 Data: <X m2            > 58 92 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000186326DF8F0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000186326E61A0, 16 bytes long.
 Data: <0 m2            > 30 92 6D 32 86 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000186326D9230, 320 bytes long.
 Data: < an2      m2    > A0 61 6E 32 86 01 00 00 F0 F8 6D 32 86 01 00 00 
{276} normal block at 0x00000186326E5C00, 16 bytes long.
 Data: <0kn2            > 30 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000186326E60B0, 16 bytes long.
 Data: < kn2            > 08 6B 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000186326DEFF0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000186326E6240, 16 bytes long.
 Data: < jn2            > E0 6A 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000186326DF530, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000186326E6740, 16 bytes long.
 Data: <(jn2            > 28 6A 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000186326E5DE0, 16 bytes long.
 Data: < jn2            > 00 6A 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000186326E61F0, 16 bytes long.
 Data: < in2            > D8 69 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000186326E66A0, 16 bytes long.
 Data: < in2            > B0 69 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000186326E5F70, 16 bytes long.
 Data: < in2            > 88 69 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000186326E5BB0, 16 bytes long.
 Data: <`in2            > 60 69 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000186326E5D90, 16 bytes long.
 Data: <PLn2            > 50 4C 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000186326E4C50, 40 bytes long.
 Data: < ]n2     mX4    > 90 5D 6E 32 86 01 00 00 C0 6D 58 34 86 01 00 00 
{262} normal block at 0x00000186326E64C0, 16 bytes long.
 Data: <@in2            > 40 69 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000186326E5B10, 16 bytes long.
 Data: < in2            > 18 69 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000186326DF890, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000186326E5C50, 16 bytes long.
 Data: < hn2            > F0 68 6E 32 86 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000186326E68F0, 992 bytes long.
 Data: <P\n2      m2    > 50 5C 6E 32 86 01 00 00 90 F8 6D 32 86 01 00 00 
{94} normal block at 0x00000186326DEC30, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000186326E0A50, 16 bytes long.
 Data: <@ l2            > 40 F0 6C 32 86 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x00000186326CF040, 40 bytes long.
 Data: <P n2    0 m2    > 50 0A 6E 32 86 01 00 00 30 EC 6D 32 86 01 00 00 
{69} normal block at 0x00000186326DFE20, 16 bytes long.
 Data: <  mt            > 80 EA 6D 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000186326E0370, 16 bytes long.
 Data: <@ mt            > 40 E9 6D 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000186326E0320, 16 bytes long.
 Data: < Wjt            > F8 57 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000186326E01E0, 16 bytes long.
 Data: < Wjt            > D8 57 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000186326E02D0, 16 bytes long.
 Data: <P jt            > 50 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000186326E0A00, 16 bytes long.
 Data: <0 jt            > 30 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000186326E0B90, 16 bytes long.
 Data: <  jt            > E0 02 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000186326E05A0, 16 bytes long.
 Data: <  jt            > 10 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000186326E0280, 16 bytes long.
 Data: <p jt            > 70 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000186326E0230, 16 bytes long.
 Data: <  ht            > 18 C0 68 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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