Task 38680935

Name test_127-GPUGRID_TEST_ATM_40STEP_20261023-10-40-RND3164_0
Workunit 31622630
Created 27 Oct 2026, 2:07:04 UTC
Sent 27 Oct 2026, 2:07:08 UTC
Report deadline 1 Nov 2026, 2:07:08 UTC
Received 27 Oct 2026, 3:14:17 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 628418
Run time 28 min 17 sec
CPU time 27 min 58 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 13,171.24 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 678.38 MB
Peak swap size 9.84 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
The operating system cannot run (null).
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
02:45:40 (25496): wrapper (7.9.26016): starting
02:45:40 (25496): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:45:42 (25496): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:45:42 (25496): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\BOINC_DATA\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINC_DATA\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "D:\BOINC_DATA\slots\0\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\atom_openmm\rbfe_production.py", line 33, in rbfe_production
    rx.scheduleJobs()
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\atom_openmm\async_re.py", line 321, in scheduleJobs
    self.transport.ProcessJobQueue(min_time,cycle_time)
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 186, in ProcessJobQueue
    self.isDone(repl,0)
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 287, in isDone
    retcode = self._update_replica(job)
              ^^^^^^^^^^^^^^^^^^^^^^^^^
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 210, in _update_replica
    (pos,vel) = job['openmm_worker'].get_posvel()
                ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\atom_openmm\ommworker.py", line 467, in get_posvel
    state = self.context.getState(getPositions=True, getVelocities=True)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "D:\BOINC_DATA\slots\0\Lib\site-packages\openmm\openmm.py", line 5022, in getState
    state = _openmm.Context_getState(self, types, enforcePeriodicBox, groups_mask)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
openmm.OpenMMException: bad allocation
03:12:50 (25496): C:/Windows/system32/cmd.exe exited; CPU time 1678.296875
03:12:50 (25496): app exit status: 0x16
03:12:50 (25496): called boinc_finish(195)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27325791 bytes.
Dumping objects ->
{3835248} normal block at 0x0000021410891480, 48 bytes long.
 Data: <PATH=D:\BOINC_DA> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5F 44 41 
{3835237} normal block at 0x0000021410A07670, 32 bytes long.
 Data: <HOME=D:\BOINC_DA> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 5F 44 41 
{3835226} normal block at 0x0000021410A07730, 32 bytes long.
 Data: <TMP=D:\BOINC_DAT> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5F 44 41 54 
{3835215} normal block at 0x0000021410A06890, 32 bytes long.
 Data: <TEMP=D:\BOINC_DA> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5F 44 41 
{3835204} normal block at 0x0000021410A06CB0, 32 bytes long.
 Data: <TMPDIR=D:\BOINC_> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 5F 
{3835173} normal block at 0x0000021410891090, 48 bytes long.
 Data: <PATH=D:\BOINC_DA> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5F 44 41 
{3835162} normal block at 0x00000214109A45C0, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835159} normal block at 0x000002140ED779B0, 8 bytes long.
 Data: <  &#203;     > 00 00 CB 0E 14 02 00 00 
{3834561} normal block at 0x00000214109A43E0, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x000002140ED776E0, 8 bytes long.
 Data: <@:&#154;     > 40 3A 9A 10 14 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x000002140ED83A60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000002140ED6B090, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x000002140ED85400, 16 bytes long.
 Data: <&#216;]&#216;             > D8 5D D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002140ED85360, 16 bytes long.
 Data: <&#176;]&#216;             > B0 5D D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002140ED7BF50, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x000002140ED84F00, 16 bytes long.
 Data: < ]&#216;             > 88 5D D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002140ED85310, 16 bytes long.
 Data: <`]&#216;             > 60 5D D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002140ED851D0, 16 bytes long.
 Data: <8]&#216;             > 38 5D D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002140ED85950, 16 bytes long.
 Data: < ]&#216;             > 10 5D D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002140ED7DA20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x000002140ED84EB0, 16 bytes long.
 Data: < a&#214;             > 88 61 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002140ED7C190, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x000002140ED85180, 16 bytes long.
 Data: <`a&#214;             > 60 61 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002140ED84DC0, 16 bytes long.
 Data: <8a&#214;             > 38 61 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002140ED85040, 16 bytes long.
 Data: < a&#214;             > 10 61 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002140ED84FF0, 16 bytes long.
 Data: <&#232;`&#214;             > E8 60 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002140ED852C0, 16 bytes long.
 Data: <&#192;`&#214;             > C0 60 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002140ED84D70, 16 bytes long.
 Data: < `&#214;             > 98 60 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002140ED7BBF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x000002140ED85270, 16 bytes long.
 Data: <p`&#214;             > 70 60 D6 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002140ED66070, 320 bytes long.
 Data: <pR&#216;     &#240;&#187;&#215;     > 70 52 D8 0E 14 02 00 00 F0 BB D7 0E 14 02 00 00 
{278} normal block at 0x000002140ED853B0, 16 bytes long.
 Data: <&#240;\&#216;             > F0 5C D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002140ED85810, 16 bytes long.
 Data: <&#200;\&#216;             > C8 5C D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002140ED7BB90, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x000002140ED85720, 16 bytes long.
 Data: <&#160;\&#216;             > A0 5C D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002140ED7C3D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x000002140ED84FA0, 16 bytes long.
 Data: <&#232;[&#216;             > E8 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002140ED85130, 16 bytes long.
 Data: <&#192;[&#216;             > C0 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002140ED84E60, 16 bytes long.
 Data: < [&#216;             > 98 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002140ED84C80, 16 bytes long.
 Data: <p[&#216;             > 70 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002140ED84E10, 16 bytes long.
 Data: <H[&#216;             > 48 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002140ED84C30, 16 bytes long.
 Data: < [&#216;             > 20 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002140ED84BE0, 16 bytes long.
 Data: <&#208;&#216;&#215;             > D0 D8 D7 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002140ED7D8D0, 40 bytes long.
 Data: <&#224;K&#216;       &#137;     > E0 4B D8 0E 14 02 00 00 90 10 89 10 14 02 00 00 
{264} normal block at 0x000002140ED85680, 16 bytes long.
 Data: < [&#216;             > 00 5B D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002140ED850E0, 16 bytes long.
 Data: <&#216;Z&#216;             > D8 5A D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002140ED7C310, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x000002140ED85A40, 16 bytes long.
 Data: <&#176;Z&#216;             > B0 5A D8 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002140ED85AB0, 992 bytes long.
 Data: <@Z&#216;      &#195;&#215;     > 40 5A D8 0E 14 02 00 00 10 C3 D7 0E 14 02 00 00 
{96} normal block at 0x000002140ED7C610, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x000002140ED77230, 16 bytes long.
 Data: <P&#213;&#215;             > 50 D5 D7 0E 14 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x000002140ED7D550, 40 bytes long.
 Data: <0r&#215;      &#198;&#215;     > 30 72 D7 0E 14 02 00 00 10 C6 D7 0E 14 02 00 00 
{73} normal block at 0x000002140ED77640, 16 bytes long.
 Data: < &#234;&#207;U&#247;           > 80 EA CF 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002140ED77780, 16 bytes long.
 Data: <@&#233;&#207;U&#247;           > 40 E9 CF 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002140ED77410, 16 bytes long.
 Data: <&#248;W&#204;U&#247;           > F8 57 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002140ED77140, 16 bytes long.
 Data: <&#216;W&#204;U&#247;           > D8 57 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002140ED770F0, 16 bytes long.
 Data: <P &#204;U&#247;           > 50 04 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002140ED76D30, 16 bytes long.
 Data: <0 &#204;U&#247;           > 30 04 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002140ED76C40, 16 bytes long.
 Data: <&#224; &#204;U&#247;           > E0 02 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002140ED770A0, 16 bytes long.
 Data: <  &#204;U&#247;           > 10 04 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002140ED77370, 16 bytes long.
 Data: <p &#204;U&#247;           > 70 04 CC 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002140ED76BA0, 16 bytes long.
 Data: < &#192;&#202;U&#247;           > 18 C0 CA 55 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra