Task 38680868

Name test_308-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND3323_0
Workunit 31622565
Created 27 Oct 2026, 2:01:16 UTC
Sent 27 Oct 2026, 2:01:21 UTC
Report deadline 1 Nov 2026, 2:01:21 UTC
Received 27 Oct 2026, 5:11:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 644440
Run time 59 min 26 sec
CPU time 59 min 26 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 8,090.66 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 745.11 MB
Peak swap size 12.90 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
00:10:19 (60116): wrapper (7.9.26016): starting
00:10:19 (60116): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:10:20 (60116): Library/usr/bin/tar.exe exited; CPU time 0.031250
00:10:20 (60116): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:10:38 (60116): C:/Windows/system32/cmd.exe exited; CPU time 3566.437500
01:10:38 (60116): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 99811107 bytes.
Dumping objects ->
{3835512} normal block at 0x0000019FF1F1EFF0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835501} normal block at 0x0000019FF00C64C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835490} normal block at 0x0000019FF00C6450, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835479} normal block at 0x0000019FF00C6760, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835468} normal block at 0x0000019FF00C6680, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835437} normal block at 0x0000019FF1F6D7F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835424} normal block at 0x0000019FF00BF3C0, 8 bytes long.
 Data: <  Y&#240;&#159;   > 00 00 59 F0 9F 01 00 00 
{3833965} normal block at 0x0000019FF00BF000, 8 bytes long.
 Data: < &#175; &#240;&#159;   > 00 AF 0E F0 9F 01 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x0000019FF00B7620, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000019FF00B86E0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x0000019FF00C6D90, 16 bytes long.
 Data: <&#200;{ &#240;&#159;           > C8 7B 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000019FF00C6B60, 16 bytes long.
 Data: <&#160;{ &#240;&#159;           > A0 7B 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000019FF00C28D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x0000019FF00C70B0, 16 bytes long.
 Data: <x{ &#240;&#159;           > 78 7B 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000019FF00C7010, 16 bytes long.
 Data: <P{ &#240;&#159;           > 50 7B 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000019FF00C6980, 16 bytes long.
 Data: <({ &#240;&#159;           > 28 7B 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000019FF00C6B10, 16 bytes long.
 Data: < { &#240;&#159;           > 00 7B 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000019FF00C60D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x0000019FF00C7740, 16 bytes long.
 Data: <&#232;  &#240;&#159;           > E8 17 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000019FF00C2030, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x0000019FF00C76A0, 16 bytes long.
 Data: <&#192;  &#240;&#159;           > C0 17 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000019FF00C7240, 16 bytes long.
 Data: <   &#240;&#159;           > 98 17 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000019FF00C7380, 16 bytes long.
 Data: <p  &#240;&#159;           > 70 17 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000019FF00C69D0, 16 bytes long.
 Data: <H  &#240;&#159;           > 48 17 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000019FF00C7650, 16 bytes long.
 Data: <   &#240;&#159;           > 20 17 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000019FF00C6FC0, 16 bytes long.
 Data: <&#248;  &#240;&#159;           > F8 16 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000019FF00C2AB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x0000019FF00C6AC0, 16 bytes long.
 Data: <&#208;  &#240;&#159;           > D0 16 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000019FF00C16D0, 320 bytes long.
 Data: <&#192;j &#240;&#159;   &#176;* &#240;&#159;   > C0 6A 0C F0 9F 01 00 00 B0 2A 0C F0 9F 01 00 00 
{278} normal block at 0x0000019FF00C6F20, 16 bytes long.
 Data: <&#224;z &#240;&#159;           > E0 7A 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000019FF00C7600, 16 bytes long.
 Data: <&#184;z &#240;&#159;           > B8 7A 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000019FF00C2870, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x0000019FF00C7290, 16 bytes long.
 Data: < z &#240;&#159;           > 90 7A 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000019FF00C29F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x0000019FF00C7060, 16 bytes long.
 Data: <&#216;y &#240;&#159;           > D8 79 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000019FF00C6BB0, 16 bytes long.
 Data: <&#176;y &#240;&#159;           > B0 79 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000019FF00C6D40, 16 bytes long.
 Data: < y &#240;&#159;           > 88 79 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000019FF00C6ED0, 16 bytes long.
 Data: <`y &#240;&#159;           > 60 79 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000019FF00C6A20, 16 bytes long.
 Data: <8y &#240;&#159;           > 38 79 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000019FF00C6F70, 16 bytes long.
 Data: < y &#240;&#159;           > 10 79 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000019FF00C6A70, 16 bytes long.
 Data: < b &#240;&#159;           > 20 62 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000019FF00C6220, 40 bytes long.
 Data: <pj &#240;&#159;   &#240;&#215;&#246;&#241;&#159;   > 70 6A 0C F0 9F 01 00 00 F0 D7 F6 F1 9F 01 00 00 
{264} normal block at 0x0000019FF00C6E30, 16 bytes long.
 Data: <&#240;x &#240;&#159;           > F0 78 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000019FF00C7560, 16 bytes long.
 Data: <&#200;x &#240;&#159;           > C8 78 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000019FF00C1F10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x0000019FF00C6930, 16 bytes long.
 Data: <&#160;x &#240;&#159;           > A0 78 0C F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000019FF00C78A0, 992 bytes long.
 Data: <0i &#240;&#159;      &#240;&#159;   > 30 69 0C F0 9F 01 00 00 10 1F 0C F0 9F 01 00 00 
{96} normal block at 0x0000019FF00C2810, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x0000019FF00BFD20, 16 bytes long.
 Data: < &#239; &#240;&#159;           > 00 EF 0A F0 9F 01 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x0000019FF00AEF00, 40 bytes long.
 Data: < &#253; &#240;&#159;    ( &#240;&#159;   > 20 FD 0B F0 9F 01 00 00 10 28 0C F0 9F 01 00 00 
{73} normal block at 0x0000019FF00BF780, 16 bytes long.
 Data: < &#234;a&#229;&#247;           > 80 EA 61 E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000019FF00BF550, 16 bytes long.
 Data: <@&#233;a&#229;&#247;           > 40 E9 61 E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000019FF00BF370, 16 bytes long.
 Data: <&#248;W^&#229;&#247;           > F8 57 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000019FF00BF320, 16 bytes long.
 Data: <&#216;W^&#229;&#247;           > D8 57 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000019FF00BFDC0, 16 bytes long.
 Data: <P ^&#229;&#247;           > 50 04 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000019FF00BF2D0, 16 bytes long.
 Data: <0 ^&#229;&#247;           > 30 04 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000019FF00BF230, 16 bytes long.
 Data: <&#224; ^&#229;&#247;           > E0 02 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000019FF00BF190, 16 bytes long.
 Data: <  ^&#229;&#247;           > 10 04 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000019FF00BFC30, 16 bytes long.
 Data: <p ^&#229;&#247;           > 70 04 5E E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000019FF00BFCD0, 16 bytes long.
 Data: < &#192;\&#229;&#247;           > 18 C0 5C E5 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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