Task 38680788

Name test_648-GPUGRID_TEST_ATM_40STEP_20261023-36-40-RND2779_0
Workunit 31622488
Created 27 Oct 2026, 1:29:02 UTC
Sent 27 Oct 2026, 1:29:20 UTC
Report deadline 1 Nov 2026, 1:29:20 UTC
Received 27 Oct 2026, 5:52:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 630191
Run time 36 min 8 sec
CPU time 33 min 39 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,394.34 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 762.30 MB
Peak swap size 12.92 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
01:16:09 (30300): wrapper (7.9.26016): starting
01:16:09 (30300): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:16:10 (30300): Library/usr/bin/tar.exe exited; CPU time 0.000000
01:16:10 (30300): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:50:57 (30300): C:/Windows/system32/cmd.exe exited; CPU time 2019.203125
01:50:57 (30300): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 41666575 bytes.
Dumping objects ->
{3835559} normal block at 0x000002533CD805E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835548} normal block at 0x000002533AF47700, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835537} normal block at 0x000002533AF47690, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835526} normal block at 0x000002533AF47620, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835515} normal block at 0x000002533AF475B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835484} normal block at 0x000002533CDCCC50, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835473} normal block at 0x000002533AFA08E0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835470} normal block at 0x000002533AF3DAE0, 8 bytes long.
 Data: <  I;S   > 00 00 49 3B 53 02 00 00 
{3834709} normal block at 0x000002533AFA0B50, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x000002533AF3E800, 8 bytes long.
 Data: <&#160;h&#226;<S   > A0 68 E2 3C 53 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x000002533AF42640, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000002533AF36890, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x000002533AF48EB0, 16 bytes long.
 Data: < &#147;&#244;:S           > 88 93 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002533AF48230, 16 bytes long.
 Data: <`&#147;&#244;:S           > 60 93 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002533AF3FCF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x000002533AF48910, 16 bytes long.
 Data: <8&#147;&#244;:S           > 38 93 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002533AF48AF0, 16 bytes long.
 Data: < &#147;&#244;:S           > 10 93 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002533AF481E0, 16 bytes long.
 Data: <&#232;&#146;&#244;:S           > E8 92 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002533AF485F0, 16 bytes long.
 Data: <&#192;&#146;&#244;:S           > C0 92 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002533AF47AF0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x000002533AF48A50, 16 bytes long.
 Data: <&#184;&#248;&#243;:S           > B8 F8 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002533AF403B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x000002533AF48E60, 16 bytes long.
 Data: < &#248;&#243;:S           > 90 F8 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002533AF488C0, 16 bytes long.
 Data: <h&#248;&#243;:S           > 68 F8 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002533AF48140, 16 bytes long.
 Data: <@&#248;&#243;:S           > 40 F8 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002533AF48E10, 16 bytes long.
 Data: < &#248;&#243;:S           > 18 F8 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002533AF48CD0, 16 bytes long.
 Data: <&#240;&#247;&#243;:S           > F0 F7 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002533AF48AA0, 16 bytes long.
 Data: <&#200;&#247;&#243;:S           > C8 F7 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002533AF3FB70, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x000002533AF48690, 16 bytes long.
 Data: <&#160;&#247;&#243;:S           > A0 F7 F3 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002533AF3F7A0, 320 bytes long.
 Data: < &#134;&#244;:S   p&#251;&#243;:S   > 90 86 F4 3A 53 02 00 00 70 FB F3 3A 53 02 00 00 
{278} normal block at 0x000002533AF48870, 16 bytes long.
 Data: <&#160;&#146;&#244;:S           > A0 92 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002533AF480F0, 16 bytes long.
 Data: <x&#146;&#244;:S           > 78 92 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002533AF40350, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x000002533AF48C30, 16 bytes long.
 Data: <P&#146;&#244;:S           > 50 92 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002533AF3FF90, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x000002533AF483C0, 16 bytes long.
 Data: < &#145;&#244;:S           > 98 91 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002533AF489B0, 16 bytes long.
 Data: <p&#145;&#244;:S           > 70 91 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002533AF48DC0, 16 bytes long.
 Data: <H&#145;&#244;:S           > 48 91 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002533AF482D0, 16 bytes long.
 Data: < &#145;&#244;:S           > 20 91 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002533AF480A0, 16 bytes long.
 Data: <&#248; &#244;:S           > F8 90 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002533AF48190, 16 bytes long.
 Data: <&#208; &#244;:S           > D0 90 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002533AF48820, 16 bytes long.
 Data: <`{&#244;:S           > 60 7B F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002533AF47B60, 40 bytes long.
 Data: <  &#244;:S   P&#204;&#220;<S   > 20 88 F4 3A 53 02 00 00 50 CC DC 3C 53 02 00 00 
{264} normal block at 0x000002533AF48D20, 16 bytes long.
 Data: <&#176; &#244;:S           > B0 90 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002533AF487D0, 16 bytes long.
 Data: <  &#244;:S           > 88 90 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002533AF40290, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x000002533AF48D70, 16 bytes long.
 Data: <` &#244;:S           > 60 90 F4 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002533AF49060, 992 bytes long.
 Data: <p &#244;:S     &#244;:S   > 70 8D F4 3A 53 02 00 00 90 02 F4 3A 53 02 00 00 
{96} normal block at 0x000002533AF404D0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x000002533AF3E260, 16 bytes long.
 Data: < &#235;&#242;:S           > 10 EB F2 3A 53 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x000002533AF2EB10, 40 bytes long.
 Data: <`&#226;&#243;:S   &#208; &#244;:S   > 60 E2 F3 3A 53 02 00 00 D0 04 F4 3A 53 02 00 00 
{73} normal block at 0x000002533AF3DD60, 16 bytes long.
 Data: < &#234;1P&#247;           > 80 EA 31 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002533AF3E580, 16 bytes long.
 Data: <@&#233;1P&#247;           > 40 E9 31 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002533AF3E0D0, 16 bytes long.
 Data: <&#248;W.P&#247;           > F8 57 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002533AF3E7B0, 16 bytes long.
 Data: <&#216;W.P&#247;           > D8 57 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002533AF3DF90, 16 bytes long.
 Data: <P .P&#247;           > 50 04 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002533AF3E1C0, 16 bytes long.
 Data: <0 .P&#247;           > 30 04 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002533AF3D9F0, 16 bytes long.
 Data: <&#224; .P&#247;           > E0 02 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002533AF3E940, 16 bytes long.
 Data: <  .P&#247;           > 10 04 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002533AF3E6C0, 16 bytes long.
 Data: <p .P&#247;           > 70 04 2E 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002533AF3E3A0, 16 bytes long.
 Data: < &#192;,P&#247;           > 18 C0 2C 50 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra