Task 38680570

Name test_185-GPUGRID_TEST_ATM_40STEP_20261023-23-40-RND9325_0
Workunit 31622286
Created 27 Oct 2026, 0:26:51 UTC
Sent 27 Oct 2026, 0:27:07 UTC
Report deadline 1 Nov 2026, 0:27:07 UTC
Received 27 Oct 2026, 7:57:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654840
Run time 1 hours 57 min 22 sec
CPU time 1 hours 35 min 53 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,029.85 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 739.77 MB
Peak swap size 8.39 GB
Peak disk usage 4.19 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
01:02:55 (89880): wrapper (7.9.26016): starting
01:02:55 (89880): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:02:58 (89880): Library/usr/bin/tar.exe exited; CPU time 0.015625
01:02:58 (89880): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:56:41 (89880): C:/Windows/system32/cmd.exe exited; CPU time 5753.765625
02:56:41 (89880): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 252623163 bytes.
Dumping objects ->
{3835485} normal block at 0x0000023119BD41E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835474} normal block at 0x0000023119BD4100, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835463} normal block at 0x0000023119BD4090, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835452} normal block at 0x0000023119BD4020, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835441} normal block at 0x0000023119BD3ED0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835410} normal block at 0x000002311BFED360, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835397} normal block at 0x0000023119BC9D00, 8 bytes long.
 Data: <  &#231; 1   > 00 00 E7 19 31 02 00 00 
{3833949} normal block at 0x0000023119BC9BC0, 8 bytes long.
 Data: <P&#201;&#191; 1   > 50 C9 BF 19 31 02 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x0000023119BC5400, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000023119BCE730, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x0000023119BD50C0, 16 bytes long.
 Data: <(W&#189; 1           > 28 57 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000023119BD4EE0, 16 bytes long.
 Data: < W&#189; 1           > 00 57 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000023119BCFCE0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x0000023119BD4440, 16 bytes long.
 Data: <&#216;V&#189; 1           > D8 56 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000023119BD47B0, 16 bytes long.
 Data: <&#176;V&#189; 1           > B0 56 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000023119BD4D00, 16 bytes long.
 Data: < V&#189; 1           > 88 56 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000023119BD5390, 16 bytes long.
 Data: <`V&#189; 1           > 60 56 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000023119BD3F40, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x0000023119BD4DF0, 16 bytes long.
 Data: <x&#244;&#187; 1           > 78 F4 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000023119BCFB60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x0000023119BD4C60, 16 bytes long.
 Data: <P&#244;&#187; 1           > 50 F4 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000023119BD4FD0, 16 bytes long.
 Data: <(&#244;&#187; 1           > 28 F4 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000023119BD5340, 16 bytes long.
 Data: < &#244;&#187; 1           > 00 F4 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000023119BD4A30, 16 bytes long.
 Data: <&#216;&#243;&#187; 1           > D8 F3 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000023119BD4A80, 16 bytes long.
 Data: <&#176;&#243;&#187; 1           > B0 F3 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000023119BD52F0, 16 bytes long.
 Data: < &#243;&#187; 1           > 88 F3 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000023119BCF9E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{272} normal block at 0x0000023119BD4C10, 16 bytes long.
 Data: <`&#243;&#187; 1           > 60 F3 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000023119BBF360, 320 bytes long.
 Data: < L&#189; 1   &#224;&#249;&#188; 1   > 10 4C BD 19 31 02 00 00 E0 F9 BC 19 31 02 00 00 
{270} normal block at 0x0000023119BD49E0, 16 bytes long.
 Data: <@V&#189; 1           > 40 56 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000023119BD4D50, 16 bytes long.
 Data: < V&#189; 1           > 18 56 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000023119BCF980, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x0000023119BD4760, 16 bytes long.
 Data: <&#240;U&#189; 1           > F0 55 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000023119BCFC80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x0000023119BD52A0, 16 bytes long.
 Data: <8U&#189; 1           > 38 55 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000023119BD5160, 16 bytes long.
 Data: < U&#189; 1           > 10 55 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000023119BD4710, 16 bytes long.
 Data: <&#232;T&#189; 1           > E8 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000023119BD48A0, 16 bytes long.
 Data: <&#192;T&#189; 1           > C0 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000023119BD4990, 16 bytes long.
 Data: < T&#189; 1           > 98 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000023119BD4940, 16 bytes long.
 Data: <pT&#189; 1           > 70 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000023119BD4BC0, 16 bytes long.
 Data: <`>&#189; 1           > 60 3E BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000023119BD3E60, 40 bytes long.
 Data: <&#192;K&#189; 1   `&#211;&#254; 1   > C0 4B BD 19 31 02 00 00 60 D3 FE 1B 31 02 00 00 
{256} normal block at 0x0000023119BD4670, 16 bytes long.
 Data: <PT&#189; 1           > 50 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000023119BD48F0, 16 bytes long.
 Data: <(T&#189; 1           > 28 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000023119BCFC20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x0000023119BD51B0, 16 bytes long.
 Data: < T&#189; 1           > 00 54 BD 19 31 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x0000023119BD5400, 992 bytes long.
 Data: <&#176;Q&#189; 1    &#252;&#188; 1   > B0 51 BD 19 31 02 00 00 20 FC BC 19 31 02 00 00 
{88} normal block at 0x0000023119BCFAA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x0000023119BC9530, 16 bytes long.
 Data: < &#216;&#187; 1           > 80 D8 BB 19 31 02 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x0000023119BBD880, 40 bytes long.
 Data: <0&#149;&#188; 1   &#160;&#250;&#188; 1   > 30 95 BC 19 31 02 00 00 A0 FA BC 19 31 02 00 00 
{65} normal block at 0x0000023119BC9490, 16 bytes long.
 Data: < &#234;U &#246;           > 80 EA 55 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000023119BC9440, 16 bytes long.
 Data: <@&#233;U &#246;           > 40 E9 55 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000023119BC93F0, 16 bytes long.
 Data: <&#248;WR &#246;           > F8 57 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000023119BC9940, 16 bytes long.
 Data: <&#216;WR &#246;           > D8 57 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000023119BC9DA0, 16 bytes long.
 Data: <P R &#246;           > 50 04 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000023119BC9B20, 16 bytes long.
 Data: <0 R &#246;           > 30 04 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000023119BC9670, 16 bytes long.
 Data: <&#224; R &#246;           > E0 02 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000023119BC98F0, 16 bytes long.
 Data: <  R &#246;           > 10 04 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000023119BC9850, 16 bytes long.
 Data: <p R &#246;           > 70 04 52 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000023119BC98A0, 16 bytes long.
 Data: < &#192;P &#246;           > 18 C0 50 99 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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