Task 38680388

Name test_361-GPUGRID_TEST_ATM_40STEP_20261023-20-40-RND9965_0
Workunit 31622110
Created 26 Oct 2026, 23:46:05 UTC
Sent 26 Oct 2026, 23:46:10 UTC
Report deadline 31 Oct 2026, 23:46:10 UTC
Received 27 Oct 2026, 1:59:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652808
Run time 41 min 7 sec
CPU time 37 min 53 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 20,847.14 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 705.75 MB
Peak swap size 5.39 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
02:18:13 (7100): wrapper (7.9.26016): starting
02:18:13 (7100): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:18:14 (7100): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:18:14 (7100): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:58:58 (7100): C:/Windows/system32/cmd.exe exited; CPU time 2273.812500
02:58:58 (7100): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 40869035 bytes.
Dumping objects ->
{3835197} normal block at 0x0000013103F08310, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835186} normal block at 0x0000013102174EE0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835175} normal block at 0x0000013102174E70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835164} normal block at 0x0000013102174E00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835153} normal block at 0x0000013102174D90, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835122} normal block at 0x0000013103EB9EE0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835109} normal block at 0x0000013102170050, 8 bytes long.
 Data: <  k 1   > 00 00 6B 02 31 01 00 00 
{3833961} normal block at 0x000001310216F6A0, 8 bytes long.
 Data: < &#220;  1   > 10 DC 15 02 31 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000013102171F60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000013102166190, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x0000013102176630, 16 bytes long.
 Data: <&#200;i  1           > C8 69 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000013102175E10, 16 bytes long.
 Data: <&#160;i  1           > A0 69 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001310216D2A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000013102175DC0, 16 bytes long.
 Data: <xi  1           > 78 69 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000131021761D0, 16 bytes long.
 Data: <Pi  1           > 50 69 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000013102175A50, 16 bytes long.
 Data: <(i  1           > 28 69 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000013102175D20, 16 bytes long.
 Data: < i  1           > 00 69 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000131021753B0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000131021763B0, 16 bytes long.
 Data: <    1           > 08 8F 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001310216D780, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000013102175CD0, 16 bytes long.
 Data: <&#224;&#142;  1           > E0 8E 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000131021757D0, 16 bytes long.
 Data: <&#184;&#142;  1           > B8 8E 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000013102175B40, 16 bytes long.
 Data: < &#142;  1           > 90 8E 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000013102176360, 16 bytes long.
 Data: <h&#142;  1           > 68 8E 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000013102175730, 16 bytes long.
 Data: <@&#142;  1           > 40 8E 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000013102176130, 16 bytes long.
 Data: < &#142;  1           > 18 8E 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001310216D5A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x0000013102176270, 16 bytes long.
 Data: <&#240;   1           > F0 8D 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000013102168DF0, 320 bytes long.
 Data: <pb  1   &#160;&#213;  1   > 70 62 17 02 31 01 00 00 A0 D5 16 02 31 01 00 00 
{276} normal block at 0x0000013102175AF0, 16 bytes long.
 Data: <&#224;h  1           > E0 68 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000131021759B0, 16 bytes long.
 Data: <&#184;h  1           > B8 68 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001310216D420, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000013102176540, 16 bytes long.
 Data: < h  1           > 90 68 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001310216D180, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000013102175C80, 16 bytes long.
 Data: <&#216;g  1           > D8 67 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000013102176310, 16 bytes long.
 Data: <&#176;g  1           > B0 67 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000131021756E0, 16 bytes long.
 Data: < g  1           > 88 67 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000131021762C0, 16 bytes long.
 Data: <`g  1           > 60 67 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000131021758C0, 16 bytes long.
 Data: <8g  1           > 38 67 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000013102175D70, 16 bytes long.
 Data: < g  1           > 10 67 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000013102175FA0, 16 bytes long.
 Data: <PO  1           > 50 4F 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000013102174F50, 40 bytes long.
 Data: <&#160;_  1   &#224;&#158;&#235; 1   > A0 5F 17 02 31 01 00 00 E0 9E EB 03 31 01 00 00 
{262} normal block at 0x0000013102175960, 16 bytes long.
 Data: <&#240;f  1           > F0 66 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000013102176590, 16 bytes long.
 Data: <&#200;f  1           > C8 66 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001310216D600, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000013102175780, 16 bytes long.
 Data: <&#160;f  1           > A0 66 17 02 31 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000131021766A0, 992 bytes long.
 Data: < W  1    &#214;  1   > 80 57 17 02 31 01 00 00 00 D6 16 02 31 01 00 00 
{94} normal block at 0x000001310216DF60, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001310216FA60, 16 bytes long.
 Data: < &#237;  1           > 80 ED 16 02 31 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001310216ED80, 40 bytes long.
 Data: <`&#250;  1   `&#223;  1   > 60 FA 16 02 31 01 00 00 60 DF 16 02 31 01 00 00 
{71} normal block at 0x000001310216F2E0, 16 bytes long.
 Data: < &#234;&#178;	&#246;           > 80 EA B2 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001310216F650, 16 bytes long.
 Data: <@&#233;&#178;	&#246;           > 40 E9 B2 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001310216FEC0, 16 bytes long.
 Data: <&#248;W&#175;	&#246;           > F8 57 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001310216F290, 16 bytes long.
 Data: <&#216;W&#175;	&#246;           > D8 57 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001310216F9C0, 16 bytes long.
 Data: <P &#175;	&#246;           > 50 04 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001310216FE70, 16 bytes long.
 Data: <0 &#175;	&#246;           > 30 04 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001310216FFB0, 16 bytes long.
 Data: <&#224; &#175;	&#246;           > E0 02 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001310216FE20, 16 bytes long.
 Data: <  &#175;	&#246;           > 10 04 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000013102170000, 16 bytes long.
 Data: <p &#175;	&#246;           > 70 04 AF 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001310216FC40, 16 bytes long.
 Data: < &#192;&#173;	&#246;           > 18 C0 AD 09 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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