Task 38680126

Name test_666-GPUGRID_TEST_ATM_40STEP_20261023-32-40-RND5125_0
Workunit 31621865
Created 26 Oct 2026, 22:53:52 UTC
Sent 26 Oct 2026, 22:53:53 UTC
Report deadline 31 Oct 2026, 22:53:53 UTC
Received 26 Oct 2026, 23:12:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 646979
Run time 16 min 56 sec
CPU time 12 min 48 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 83,070.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 765.98 MB
Peak swap size 10.18 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
07:55:36 (25888): wrapper (7.9.26016): starting
07:55:36 (25888): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:55:37 (25888): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:55:37 (25888): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:11:52 (25888): C:/Windows/system32/cmd.exe exited; CPU time 768.781250
08:11:52 (25888): called boinc_finish(0)
0 bytes in 0 Free Blocks.
456 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 19060793 bytes.
Dumping objects ->
{3835586} normal block at 0x000001D543F3DC10, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835575} normal block at 0x000001D543F3DBA0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835564} normal block at 0x000001D541FC6B10, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835553} normal block at 0x000001D541FC65D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835542} normal block at 0x000001D541FC6AA0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835511} normal block at 0x000001D543F8AD20, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835500} normal block at 0x000001D543F9D840, 100 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835497} normal block at 0x000001D541FC0580, 8 bytes long.
 Data: <  RB&#213;   > 00 00 52 42 D5 01 00 00 
{3834771} normal block at 0x000001D543F9D0C0, 100 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3834061} normal block at 0x000001D541FC0F30, 8 bytes long.
 Data: < X D&#213;   > 10 58 01 44 D5 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001D541FC3110, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001D541FB7B80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000001D541FC6F20, 16 bytes long.
 Data: <   A&#213;           > 88 01 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001D541FC7560, 16 bytes long.
 Data: <`  A&#213;           > 60 01 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001D541FBF1C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000001D541FC6ED0, 16 bytes long.
 Data: <8  A&#213;           > 38 01 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001D541FC7AB0, 16 bytes long.
 Data: <   A&#213;           > 10 01 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001D541FC72E0, 16 bytes long.
 Data: <   A&#213;           > E8 00 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001D541FC7B00, 16 bytes long.
 Data: <&#192;  A&#213;           > C0 00 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001D541FC68E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000001D541FC7A60, 16 bytes long.
 Data: < &#183; A&#213;           > 88 B7 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001D541FBEB60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000001D541FC7240, 16 bytes long.
 Data: <`&#183; A&#213;           > 60 B7 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001D541FC7290, 16 bytes long.
 Data: <8&#183; A&#213;           > 38 B7 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001D541FC7A10, 16 bytes long.
 Data: < &#183; A&#213;           > 10 B7 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001D541FC6DE0, 16 bytes long.
 Data: < &#182; A&#213;           > E8 B6 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001D541FC77E0, 16 bytes long.
 Data: <&#192;&#182; A&#213;           > C0 B6 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001D541FC7D30, 16 bytes long.
 Data: < &#182; A&#213;           > 98 B6 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001D541FBEF20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000001D541FC7920, 16 bytes long.
 Data: <p&#182; A&#213;           > 70 B6 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001D541FAB670, 320 bytes long.
 Data: < y A&#213;      A&#213;   > 20 79 FC 41 D5 01 00 00 20 EF FB 41 D5 01 00 00 
{277} normal block at 0x000001D541FC6E80, 16 bytes long.
 Data: <   A&#213;           > A0 00 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001D541FC7150, 16 bytes long.
 Data: <x  A&#213;           > 78 00 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001D541FBF7C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000001D541FC71A0, 16 bytes long.
 Data: <P  A&#213;           > 50 00 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001D541FBF5E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000001D541FC7CE0, 16 bytes long.
 Data: <   A&#213;           > 98 FF FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001D541FC7790, 16 bytes long.
 Data: <p  A&#213;           > 70 FF FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001D541FC7C90, 16 bytes long.
 Data: <H  A&#213;           > 48 FF FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001D541FC7330, 16 bytes long.
 Data: <   A&#213;           > 20 FF FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001D541FC6E30, 16 bytes long.
 Data: <   A&#213;           > F8 FE FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001D541FC08F0, 16 bytes long.
 Data: <&#208;  A&#213;           > D0 FE FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001D541FC08A0, 16 bytes long.
 Data: < h A&#213;           > 00 68 FC 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001D541FC6800, 40 bytes long.
 Data: <   A&#213;    &#173; C&#213;   > A0 08 FC 41 D5 01 00 00 20 AD F8 43 D5 01 00 00 
{263} normal block at 0x000001D541FC1020, 16 bytes long.
 Data: <&#176;  A&#213;           > B0 FE FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001D541FC0D50, 16 bytes long.
 Data: <   A&#213;           > 88 FE FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001D541FBEB00, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000001D541FC0850, 16 bytes long.
 Data: <`  A&#213;           > 60 FE FB 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001D541FBFE60, 992 bytes long.
 Data: <P  A&#213;      A&#213;   > 50 08 FC 41 D5 01 00 00 00 EB FB 41 D5 01 00 00 
{95} normal block at 0x000001D541FBF640, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001D541FC0DF0, 16 bytes long.
 Data: < &#195; A&#213;           > E0 C3 FA 41 D5 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000001D541FAC3E0, 40 bytes long.
 Data: <   A&#213;   @  A&#213;   > F0 0D FC 41 D5 01 00 00 40 F6 FB 41 D5 01 00 00 
{70} normal block at 0x000001D541FC1340, 16 bytes long.
 Data: <                > 80 EA E9 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001D541FC11B0, 16 bytes long.
 Data: <@               > 40 E9 E9 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001D541FC0CB0, 16 bytes long.
 Data: < W              > F8 57 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001D541FC1110, 16 bytes long.
 Data: <&#216;W              > D8 57 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001D541FC0D00, 16 bytes long.
 Data: <P               > 50 04 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001D541FC0FD0, 16 bytes long.
 Data: <0               > 30 04 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001D541FC1160, 16 bytes long.
 Data: <                > E0 02 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001D541FC10C0, 16 bytes long.
 Data: <                > 10 04 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001D541FC0B20, 16 bytes long.
 Data: <p               > 70 04 E6 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001D541FC0670, 16 bytes long.
 Data: < &#192;              > 18 C0 E4 F7 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra