Task 38680072

Name test_705-GPUGRID_TEST_ATM_40STEP_20261023-31-40-RND2737_0
Workunit 31621817
Created 26 Oct 2026, 22:43:05 UTC
Sent 26 Oct 2026, 22:43:11 UTC
Report deadline 31 Oct 2026, 22:43:11 UTC
Received 26 Oct 2026, 23:11:24 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 605313
Run time 24 min 22 sec
CPU time 22 min 6 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 11,247.14 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 725.02 MB
Peak swap size 9.79 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:52:55 (40472): wrapper (7.9.26016): starting
17:52:55 (40472): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:52:56 (40472): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:52:56 (40472): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:16:26 (40472): C:/Windows/system32/cmd.exe exited; CPU time 1326.390625
18:16:26 (40472): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 28458839 bytes.
Dumping objects ->
{3835221} normal block at 0x000002160AA697B0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835210} normal block at 0x000002160AA69DD0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835199} normal block at 0x000002160AA6A310, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835188} normal block at 0x000002160AA69B30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835177} normal block at 0x000002160AA69F20, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835146} normal block at 0x000002160C74B4F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835133} normal block at 0x000002160AA3BA70, 8 bytes long.
 Data: <        > 00 00 9D 0A 16 02 00 00 
{3833975} normal block at 0x000002160AA3AD00, 8 bytes long.
 Data: <PY}     > 50 59 7D 0C 16 02 00 00 
..\zip\boinc_zip.cpp(122) : {319} normal block at 0x000002160AA43110, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{304} normal block at 0x000002160AA2FFF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{303} normal block at 0x000002160AA46FA0, 16 bytes long.
 Data: <(t&#164;             > 28 74 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000002160AA467D0, 16 bytes long.
 Data: < t&#164;             > 00 74 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000002160AA3F3E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{300} normal block at 0x000002160AA466E0, 16 bytes long.
 Data: <&#216;s&#164;             > D8 73 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000002160AA46410, 16 bytes long.
 Data: <&#176;s&#164;             > B0 73 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002160AA46640, 16 bytes long.
 Data: < s&#164;             > 88 73 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002160AA463C0, 16 bytes long.
 Data: <`s&#164;             > 60 73 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002160AA3FDF0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{295} normal block at 0x000002160AA46230, 16 bytes long.
 Data: <X &#163;             > 58 08 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002160AA3F200, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{293} normal block at 0x000002160AA461E0, 16 bytes long.
 Data: <0 &#163;             > 30 08 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002160AA468C0, 16 bytes long.
 Data: <  &#163;             > 08 08 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002160AA46320, 16 bytes long.
 Data: <&#224; &#163;             > E0 07 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002160AA46780, 16 bytes long.
 Data: <&#184; &#163;             > B8 07 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002160AA47040, 16 bytes long.
 Data: <  &#163;             > 90 07 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002160AA46690, 16 bytes long.
 Data: <h &#163;             > 68 07 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002160AA3F980, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{285} normal block at 0x000002160AA46460, 16 bytes long.
 Data: <@ &#163;             > 40 07 A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002160AA30740, 320 bytes long.
 Data: <`d&#164;      &#249;&#163;     > 60 64 A4 0A 16 02 00 00 80 F9 A3 0A 16 02 00 00 
{283} normal block at 0x000002160AA465A0, 16 bytes long.
 Data: <@s&#164;             > 40 73 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002160AA47090, 16 bytes long.
 Data: < s&#164;             > 18 73 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002160AA3F260, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{280} normal block at 0x000002160AA46500, 16 bytes long.
 Data: <&#240;r&#164;             > F0 72 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002160AA3EB40, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{278} normal block at 0x000002160AA46D20, 16 bytes long.
 Data: <8r&#164;             > 38 72 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002160AA46D70, 16 bytes long.
 Data: < r&#164;             > 10 72 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002160AA46AF0, 16 bytes long.
 Data: <&#232;q&#164;             > E8 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002160AA46F50, 16 bytes long.
 Data: <&#192;q&#164;             > C0 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002160AA46190, 16 bytes long.
 Data: < q&#164;             > 98 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002160AA46C30, 16 bytes long.
 Data: <pq&#164;             > 70 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002160AA46370, 16 bytes long.
 Data: <p &#164;             > 70 01 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002160AA40170, 40 bytes long.
 Data: <pc&#164;     &#240;&#180;t     > 70 63 A4 0A 16 02 00 00 F0 B4 74 0C 16 02 00 00 
{269} normal block at 0x000002160AA46730, 16 bytes long.
 Data: <Pq&#164;             > 50 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002160AA464B0, 16 bytes long.
 Data: <(q&#164;             > 28 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002160AA3F320, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{266} normal block at 0x000002160AA465F0, 16 bytes long.
 Data: < q&#164;             > 00 71 A4 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002160AA47100, 992 bytes long.
 Data: <&#240;e&#164;      &#243;&#163;     > F0 65 A4 0A 16 02 00 00 20 F3 A3 0A 16 02 00 00 
{101} normal block at 0x000002160AA3F740, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{100} normal block at 0x000002160AA3B070, 16 bytes long.
 Data: <&#160;&#252;&#163;             > A0 FC A3 0A 16 02 00 00 00 00 00 00 00 00 00 00 
{99} normal block at 0x000002160AA3FCA0, 40 bytes long.
 Data: <p&#176;&#163;     @&#247;&#163;     > 70 B0 A3 0A 16 02 00 00 40 F7 A3 0A 16 02 00 00 
{78} normal block at 0x000002160AA3AD50, 16 bytes long.
 Data: < &#234;&#178;&#243;&#247;           > 80 EA B2 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x000002160AA3B660, 16 bytes long.
 Data: <@&#233;&#178;&#243;&#247;           > 40 E9 B2 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x000002160AA3B110, 16 bytes long.
 Data: <&#248;W&#175;&#243;&#247;           > F8 57 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000002160AA3B020, 16 bytes long.
 Data: <&#216;W&#175;&#243;&#247;           > D8 57 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000002160AA3B390, 16 bytes long.
 Data: <P &#175;&#243;&#247;           > 50 04 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000002160AA3AFD0, 16 bytes long.
 Data: <0 &#175;&#243;&#247;           > 30 04 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002160AA3AF80, 16 bytes long.
 Data: <&#224; &#175;&#243;&#247;           > E0 02 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002160AA3B200, 16 bytes long.
 Data: <  &#175;&#243;&#247;           > 10 04 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002160AA3B7F0, 16 bytes long.
 Data: <p &#175;&#243;&#247;           > 70 04 AF F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002160AA3B980, 16 bytes long.
 Data: < &#192;&#173;&#243;&#247;           > 18 C0 AD F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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