Task 38680015

Name test_627-GPUGRID_TEST_ATM_40STEP_20261023-4-40-RND2240_0
Workunit 31621761
Created 26 Oct 2026, 22:30:57 UTC
Sent 26 Oct 2026, 22:31:05 UTC
Report deadline 31 Oct 2026, 22:31:05 UTC
Received 26 Oct 2026, 23:21:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 623100
Run time 22 min 44 sec
CPU time 21 min 12 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 31,239.72 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 786.37 MB
Peak swap size 10.03 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
00:59:22 (9772): wrapper (7.9.26016): starting
00:59:22 (9772): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:59:23 (9772): Library/usr/bin/tar.exe exited; CPU time 0.000000
00:59:23 (9772): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:21:19 (9772): C:/Windows/system32/cmd.exe exited; CPU time 1272.140625
01:21:19 (9772): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 20450813 bytes.
Dumping objects ->
{3835317} normal block at 0x0000017FCEB74FC0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835306} normal block at 0x0000017FCEB75180, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835295} normal block at 0x0000017FCEB75490, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835284} normal block at 0x0000017FCEB75030, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835273} normal block at 0x0000017FCEB75420, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835242} normal block at 0x0000017FD08A8600, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835231} normal block at 0x0000017FD08BED60, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835228} normal block at 0x0000017FCEB6DC80, 8 bytes long.
 Data: <   &#208;    > 00 00 9C D0 7F 01 00 00 
{3834592} normal block at 0x0000017FD08BECB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000017FCEB6D780, 8 bytes long.
 Data: <p&#233;&#196;&#206;    > 70 E9 C4 CE 7F 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000017FCEB716E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000017FCEB65AD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000017FCEB760E0, 16 bytes long.
 Data: <&#184;j&#183;&#206;            > B8 6A B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000017FCEB75C80, 16 bytes long.
 Data: < j&#183;&#206;            > 90 6A B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000017FCEB6F0B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000017FCEB76450, 16 bytes long.
 Data: <hj&#183;&#206;            > 68 6A B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000017FCEB75E10, 16 bytes long.
 Data: <@j&#183;&#206;            > 40 6A B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000017FCEB76720, 16 bytes long.
 Data: < j&#183;&#206;            > 18 6A B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000017FCEB765E0, 16 bytes long.
 Data: <&#240;i&#183;&#206;            > F0 69 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000017FCEB75650, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000017FCEB75A50, 16 bytes long.
 Data: < &#236;&#182;&#206;            > 98 EC B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000017FCEB6F6B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000017FCEB76270, 16 bytes long.
 Data: <p&#236;&#182;&#206;            > 70 EC B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000017FCEB75F00, 16 bytes long.
 Data: <H&#236;&#182;&#206;            > 48 EC B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000017FCEB75C30, 16 bytes long.
 Data: < &#236;&#182;&#206;            > 20 EC B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000017FCEB763B0, 16 bytes long.
 Data: <&#248;&#235;&#182;&#206;            > F8 EB B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000017FCEB75CD0, 16 bytes long.
 Data: <&#208;&#235;&#182;&#206;            > D0 EB B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000017FCEB76360, 16 bytes long.
 Data: <&#168;&#235;&#182;&#206;            > A8 EB B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000017FCEB6F290, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000017FCEB75AA0, 16 bytes long.
 Data: < &#235;&#182;&#206;            > 80 EB B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000017FCEB6EB80, 320 bytes long.
 Data: <&#160;Z&#183;&#206;     &#242;&#182;&#206;    > A0 5A B7 CE 7F 01 00 00 90 F2 B6 CE 7F 01 00 00 
{280} normal block at 0x0000017FCEB76130, 16 bytes long.
 Data: <&#208;i&#183;&#206;            > D0 69 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000017FCEB766D0, 16 bytes long.
 Data: <&#168;i&#183;&#206;            > A8 69 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000017FCEB6F8F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000017FCEB757D0, 16 bytes long.
 Data: < i&#183;&#206;            > 80 69 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000017FCEB6F230, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000017FCEB75EB0, 16 bytes long.
 Data: <&#200;h&#183;&#206;            > C8 68 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000017FCEB76630, 16 bytes long.
 Data: <&#160;h&#183;&#206;            > A0 68 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000017FCEB76680, 16 bytes long.
 Data: <xh&#183;&#206;            > 78 68 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000017FCEB76220, 16 bytes long.
 Data: <Ph&#183;&#206;            > 50 68 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000017FCEB75D70, 16 bytes long.
 Data: <(h&#183;&#206;            > 28 68 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000017FCEB75A00, 16 bytes long.
 Data: < h&#183;&#206;            > 00 68 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000017FCEB761D0, 16 bytes long.
 Data: <`R&#183;&#206;            > 60 52 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000017FCEB75260, 40 bytes long.
 Data: <&#208;a&#183;&#206;     &#134; &#208;    > D0 61 B7 CE 7F 01 00 00 00 86 8A D0 7F 01 00 00 
{266} normal block at 0x0000017FCEB759B0, 16 bytes long.
 Data: <&#224;g&#183;&#206;            > E0 67 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000017FCEB75FF0, 16 bytes long.
 Data: <&#184;g&#183;&#206;            > B8 67 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000017FCEB6FCB0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000017FCEB76180, 16 bytes long.
 Data: < g&#183;&#206;            > 90 67 B7 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000017FCEB76790, 992 bytes long.
 Data: < a&#183;&#206;    &#176;&#252;&#182;&#206;    > 80 61 B7 CE 7F 01 00 00 B0 FC B6 CE 7F 01 00 00 
{98} normal block at 0x0000017FCEB6FA70, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000017FCEB6D4B0, 16 bytes long.
 Data: <` &#182;&#206;            > 60 8E B6 CE 7F 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000017FCEB68E60, 40 bytes long.
 Data: <&#176;&#212;&#182;&#206;    p&#250;&#182;&#206;    > B0 D4 B6 CE 7F 01 00 00 70 FA B6 CE 7F 01 00 00 
{75} normal block at 0x0000017FCEB6CFB0, 16 bytes long.
 Data: < &#234;i &#246;           > 80 EA 69 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000017FCEB6D870, 16 bytes long.
 Data: <@&#233;i &#246;           > 40 E9 69 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000017FCEB6D000, 16 bytes long.
 Data: <&#248;Wf &#246;           > F8 57 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000017FCEB6D820, 16 bytes long.
 Data: <&#216;Wf &#246;           > D8 57 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000017FCEB6D050, 16 bytes long.
 Data: <P f &#246;           > 50 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000017FCEB6D3C0, 16 bytes long.
 Data: <0 f &#246;           > 30 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000017FCEB6D8C0, 16 bytes long.
 Data: <&#224; f &#246;           > E0 02 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000017FCEB6D410, 16 bytes long.
 Data: <  f &#246;           > 10 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000017FCEB6D370, 16 bytes long.
 Data: <p f &#246;           > 70 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000017FCEB6D730, 16 bytes long.
 Data: < &#192;d &#246;           > 18 C0 64 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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