Task 38679944

Name test_428-GPUGRID_TEST_ATM_40STEP_20261023-34-40-RND8580_0
Workunit 31621696
Created 26 Oct 2026, 22:16:27 UTC
Sent 26 Oct 2026, 22:16:33 UTC
Report deadline 31 Oct 2026, 22:16:33 UTC
Received 26 Oct 2026, 23:56:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 630161
Run time 24 min 1 sec
CPU time 22 min 28 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,749.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 721.94 MB
Peak swap size 9.99 GB
Peak disk usage 3.11 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
19:33:12 (15996): wrapper (7.9.26016): starting
19:33:12 (15996): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:33:14 (15996): Library/usr/bin/tar.exe exited; CPU time 0.000000
19:33:14 (15996): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\BOINC\slots\10\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINC\slots\10\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
19:56:12 (15996): C:/Windows/system32/cmd.exe exited; CPU time 1348.640625
19:56:12 (15996): called boinc_finish(0)
0 bytes in 0 Free Blocks.
346 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 20737586 bytes.
Dumping objects ->
{3835203} normal block at 0x0000018F24FF7A10, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835192} normal block at 0x0000018F27B079D0, 32 bytes long.
 Data: <HOME=D:\BOINC\sl> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835181} normal block at 0x0000018F27B07FD0, 32 bytes long.
 Data: <TMP=D:\BOINC\slo> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835170} normal block at 0x0000018F27B07970, 32 bytes long.
 Data: <TEMP=D:\BOINC\sl> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835159} normal block at 0x0000018F27B07A30, 32 bytes long.
 Data: <TMPDIR=D:\BOINC\> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 5C 
{3835128} normal block at 0x0000018F24FF7850, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835117} normal block at 0x0000018F27ACEAC0, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835114} normal block at 0x0000018F24FD4220, 8 bytes long.
 Data: <  &#247;$    > 00 00 F7 24 8F 01 00 00 
{3834520} normal block at 0x0000018F27ACDB20, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833947} normal block at 0x0000018F24FD4D10, 8 bytes long.
 Data: <&#176;&&#177;'    > B0 26 B1 27 8F 01 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x0000018F24FD2FA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000018F24FD0E10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x0000018F24FD5080, 16 bytes long.
 Data: < @&#253;$            > 88 40 FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000018F24FD41D0, 16 bytes long.
 Data: <`@&#253;$            > 60 40 FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000018F24FCF770, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x0000018F24FD4E50, 16 bytes long.
 Data: <8@&#253;$            > 38 40 FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000018F24FD47C0, 16 bytes long.
 Data: < @&#253;$            > 10 40 FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000018F24FD48B0, 16 bytes long.
 Data: <&#232;?&#253;$            > E8 3F FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000018F24FC96B0, 16 bytes long.
 Data: <&#192;?&#253;$            > C0 3F FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000018F24FCE3F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x0000018F24FC9660, 16 bytes long.
 Data: <(&#161;&#251;$            > 28 A1 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000018F24FCF470, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x0000018F24FC93E0, 16 bytes long.
 Data: < &#161;&#251;$            > 00 A1 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000018F24FC92F0, 16 bytes long.
 Data: <&#216;&#160;&#251;$            > D8 A0 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000018F24FC9610, 16 bytes long.
 Data: <&#176;&#160;&#251;$            > B0 A0 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000018F24FD2560, 16 bytes long.
 Data: < &#160;&#251;$            > 88 A0 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000018F24FD2880, 16 bytes long.
 Data: <`&#160;&#251;$            > 60 A0 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000018F24FD2A60, 16 bytes long.
 Data: <8&#160;&#251;$            > 38 A0 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000018F24FCF0B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x0000018F24FD2920, 16 bytes long.
 Data: < &#160;&#251;$            > 10 A0 FB 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000018F24FBA010, 320 bytes long.
 Data: < )&#253;$    &#176;&#240;&#252;$    > 20 29 FD 24 8F 01 00 00 B0 F0 FC 24 8F 01 00 00 
{269} normal block at 0x0000018F24FD2C90, 16 bytes long.
 Data: <&#160;?&#253;$            > A0 3F FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000018F24FD2BA0, 16 bytes long.
 Data: <x?&#253;$            > 78 3F FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000018F24FCF8F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x0000018F24FD2830, 16 bytes long.
 Data: <P?&#253;$            > 50 3F FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000018F24FCF1D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x0000018F24FD27E0, 16 bytes long.
 Data: < >&#253;$            > 98 3E FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000018F24FD26F0, 16 bytes long.
 Data: <p>&#253;$            > 70 3E FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000018F24FD25B0, 16 bytes long.
 Data: <H>&#253;$            > 48 3E FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000018F24FD2AB0, 16 bytes long.
 Data: < >&#253;$            > 20 3E FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000018F24FD2B00, 16 bytes long.
 Data: <&#248;=&#253;$            > F8 3D FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000018F24FC94D0, 16 bytes long.
 Data: <&#208;=&#253;$            > D0 3D FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000018F24FC9340, 16 bytes long.
 Data: <&#176;&#222;&#252;$            > B0 DE FC 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000018F24FCDEB0, 40 bytes long.
 Data: <@&#147;&#252;$    Px&#255;$    > 40 93 FC 24 8F 01 00 00 50 78 FF 24 8F 01 00 00 
{255} normal block at 0x0000018F24FC9200, 16 bytes long.
 Data: <&#176;=&#253;$            > B0 3D FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000018F24FC92A0, 16 bytes long.
 Data: < =&#253;$            > 88 3D FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000018F24FCEE10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x0000018F24FC8F80, 16 bytes long.
 Data: <`=&#253;$            > 60 3D FD 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x0000018F24FD3D60, 992 bytes long.
 Data: <  &#252;$     &#238;&#252;$    > 80 8F FC 24 8F 01 00 00 10 EE FC 24 8F 01 00 00 
{87} normal block at 0x0000018F24FCF890, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x0000018F24FC9390, 16 bytes long.
 Data: < &#224;&#252;$            > 00 E0 FC 24 8F 01 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x0000018F24FCE000, 40 bytes long.
 Data: < &#147;&#252;$     &#248;&#252;$    > 90 93 FC 24 8F 01 00 00 90 F8 FC 24 8F 01 00 00 
{64} normal block at 0x0000018F24FC9890, 16 bytes long.
 Data: < &#234;8m&#246;           > 80 EA 38 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000018F24FC8EE0, 16 bytes long.
 Data: <@&#233;8m&#246;           > 40 E9 38 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000018F24FC95C0, 16 bytes long.
 Data: <&#248;W5m&#246;           > F8 57 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000018F24FC8E90, 16 bytes long.
 Data: <&#216;W5m&#246;           > D8 57 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000018F24FC8DF0, 16 bytes long.
 Data: <P 5m&#246;           > 50 04 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000018F24FC89E0, 16 bytes long.
 Data: <0 5m&#246;           > 30 04 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000018F24FC8A80, 16 bytes long.
 Data: <&#224; 5m&#246;           > E0 02 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000018F24FC8FD0, 16 bytes long.
 Data: <  5m&#246;           > 10 04 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000018F24FC8B20, 16 bytes long.
 Data: <p 5m&#246;           > 70 04 35 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000018F24FC8E40, 16 bytes long.
 Data: < &#192;3m&#246;           > 18 C0 33 6D F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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