Task 38679847

Name test_51-GPUGRID_TEST_ATM_40STEP_20261023-19-40-RND5673_0
Workunit 31621607
Created 26 Oct 2026, 21:58:57 UTC
Sent 26 Oct 2026, 21:59:03 UTC
Report deadline 31 Oct 2026, 21:59:03 UTC
Received 27 Oct 2026, 9:54:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648712
Run time 44 min 30 sec
CPU time 44 min 9 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,710.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 648.39 MB
Peak swap size 6.75 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
06:44:21 (33336): wrapper (7.9.26016): starting
06:44:21 (33336): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
06:44:22 (33336): Library/usr/bin/tar.exe exited; CPU time 0.000000
06:44:22 (33336): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
17:15:44 (15864): wrapper (7.9.26016): starting
17:15:44 (15864): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#164;l&#165;&#216;&#191;&#253;&#169;&#206;&#192;&#201;&#174;&#215; C:\ProgramData\BOINC\slots\0\tmp &#164;w&#184;g&#166;s&#166;b&#161;C
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:53:40 (15864): C:/Windows/system32/cmd.exe exited; CPU time 2314.218750
17:53:40 (15864): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 33997398 bytes.
Dumping objects ->
{1528} normal block at 0x000002A07685A040, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1517} normal block at 0x000002A076850850, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1506} normal block at 0x000002A076850E70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1495} normal block at 0x000002A0768507E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1484} normal block at 0x000002A0768508C0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1453} normal block at 0x000002A076871D80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {1440} normal block at 0x000002A0768586F0, 8 bytes long.
 Data: <  *x    > 00 00 2A 78 A0 02 00 00 
{298} normal block at 0x000002A0768581F0, 8 bytes long.
 Data: <@  v    > 40 8E 85 76 A0 02 00 00 
{289} normal block at 0x000002A076851760, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002A0768584C0, 16 bytes long.
 Data: <8} v            > 38 7D 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002A076858C90, 16 bytes long.
 Data: < } v            > 10 7D 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002A076852630, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002A076858B50, 16 bytes long.
 Data: < | v            > E8 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002A076857E80, 16 bytes long.
 Data: < | v            > C0 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002A076858C40, 16 bytes long.
 Data: < | v            > 98 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002A076858970, 16 bytes long.
 Data: <p| v            > 70 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002A076850E00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002A0768586A0, 16 bytes long.
 Data: <   v            > F8 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002A076852450, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002A076854080, 16 bytes long.
 Data: <   v            > D0 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002A0768543A0, 16 bytes long.
 Data: <   v            > A8 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002A076853EF0, 16 bytes long.
 Data: <   v            > 80 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002A076853E00, 16 bytes long.
 Data: <X  v            > 58 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002A076853C20, 16 bytes long.
 Data: <0  v            > 30 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002A076854350, 16 bytes long.
 Data: <   v            > 08 16 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002A076851EB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000002A076854670, 16 bytes long.
 Data: <   v            > E0 15 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002A0768515E0, 320 bytes long.
 Data: <pF v       v    > 70 46 85 76 A0 02 00 00 B0 1E 85 76 A0 02 00 00 
{268} normal block at 0x000002A0768541C0, 16 bytes long.
 Data: <P| v            > 50 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002A076853B80, 16 bytes long.
 Data: <(| v            > 28 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002A076851E50, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002A076853A40, 16 bytes long.
 Data: < | v            > 00 7C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002A0768526F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002A076853B30, 16 bytes long.
 Data: <H{ v            > 48 7B 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002A0768539F0, 16 bytes long.
 Data: < { v            > 20 7B 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002A076853950, 16 bytes long.
 Data: < z v            > F8 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002A0768539A0, 16 bytes long.
 Data: < z v            > D0 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002A076853900, 16 bytes long.
 Data: < z v            > A8 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002A076853D60, 16 bytes long.
 Data: < z v            > 80 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002A076854580, 16 bytes long.
 Data: <   v            > E0 0E 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002A076850EE0, 40 bytes long.
 Data: < E v       v    > 80 45 85 76 A0 02 00 00 80 1D 87 76 A0 02 00 00 
{254} normal block at 0x000002A076854530, 16 bytes long.
 Data: <`z v            > 60 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002A0768544E0, 16 bytes long.
 Data: <8z v            > 38 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002A076851D30, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002A076853E50, 16 bytes long.
 Data: < z v            > 10 7A 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002A076857A10, 992 bytes long.
 Data: <P> v    0  v    > 50 3E 85 76 A0 02 00 00 30 1D 85 76 A0 02 00 00 
{86} normal block at 0x000002A076852510, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002A076854030, 16 bytes long.
 Data: <@  v            > 40 0C 85 76 A0 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002A076850C40, 40 bytes long.
 Data: <0@ v     % v    > 30 40 85 76 A0 02 00 00 10 25 85 76 A0 02 00 00 
{61} normal block at 0x000002A076853F90, 16 bytes long.
 Data: <   J            > 80 EA 15 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002A076853F40, 16 bytes long.
 Data: <@  J            > 40 E9 15 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002A076853EA0, 16 bytes long.
 Data: < W J            > F8 57 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002A076853DB0, 16 bytes long.
 Data: < W J            > D8 57 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002A076854850, 16 bytes long.
 Data: <P  J            > 50 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002A0768543F0, 16 bytes long.
 Data: <0  J            > 30 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002A076854800, 16 bytes long.
 Data: <   J            > E0 02 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002A076853BD0, 16 bytes long.
 Data: <   J            > 10 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000002A076853A90, 16 bytes long.
 Data: <p  J            > 70 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000002A0768540D0, 16 bytes long.
 Data: <   J            > 18 C0 10 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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