Task 38679745

Name test_935-GPUGRID_TEST_ATM_40STEP_20261023-26-40-RND7201_0
Workunit 31621508
Created 26 Oct 2026, 21:36:36 UTC
Sent 26 Oct 2026, 21:36:43 UTC
Report deadline 31 Oct 2026, 21:36:43 UTC
Received 26 Oct 2026, 22:58:44 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 623100
Run time 23 min
CPU time 21 min 13 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 31,239.72 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 769.33 MB
Peak swap size 10.02 GB
Peak disk usage 3.11 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
00:36:18 (5100): wrapper (7.9.26016): starting
00:36:18 (5100): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:36:20 (5100): Library/usr/bin/tar.exe exited; CPU time 0.000000
00:36:20 (5100): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:58:31 (5100): C:/Windows/system32/cmd.exe exited; CPU time 1273.984375
00:58:31 (5100): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 20699567 bytes.
Dumping objects ->
{3835317} normal block at 0x000001F19BEF5510, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835306} normal block at 0x000001F19BEF54A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835295} normal block at 0x000001F19BEF5430, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835284} normal block at 0x000001F19BEF53C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835273} normal block at 0x000001F19BEF5350, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835242} normal block at 0x000001F19DC9BF00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835231} normal block at 0x000001F19DCAEC00, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835228} normal block at 0x000001F19BEEF0F0, 8 bytes long.
 Data: <  I &#241;   > 00 00 49 9C F1 01 00 00 
{3834592} normal block at 0x000001F19DCAE730, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x000001F19BEEF500, 8 bytes long.
 Data: <0&#212;&#252;&#155;&#241;   > 30 D4 FC 9B F1 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x000001F19BEF15A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000001F19BEE5ED0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x000001F19BEF5A00, 16 bytes long.
 Data: <xi&#239;&#155;&#241;           > 78 69 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001F19BEF5CD0, 16 bytes long.
 Data: <Pi&#239;&#155;&#241;           > 50 69 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001F19BEEDC90, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x000001F19BEF58C0, 16 bytes long.
 Data: <(i&#239;&#155;&#241;           > 28 69 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001F19BEF5690, 16 bytes long.
 Data: < i&#239;&#155;&#241;           > 00 69 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001F19BEF6180, 16 bytes long.
 Data: <&#216;h&#239;&#155;&#241;           > D8 68 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F19BEF64F0, 16 bytes long.
 Data: <&#176;h&#239;&#155;&#241;           > B0 68 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F19BEF4EF0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x000001F19BEF64A0, 16 bytes long.
 Data: <8&#143;&#238;&#155;&#241;           > 38 8F EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001F19BEEDBD0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x000001F19BEF6450, 16 bytes long.
 Data: < &#143;&#238;&#155;&#241;           > 10 8F EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001F19BEF5870, 16 bytes long.
 Data: <&#232; &#238;&#155;&#241;           > E8 8E EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001F19BEF6400, 16 bytes long.
 Data: <&#192; &#238;&#155;&#241;           > C0 8E EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F19BEF57D0, 16 bytes long.
 Data: <  &#238;&#155;&#241;           > 98 8E EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001F19BEF56E0, 16 bytes long.
 Data: <p &#238;&#155;&#241;           > 70 8E EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001F19BEF5C30, 16 bytes long.
 Data: <H &#238;&#155;&#241;           > 48 8E EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F19BEEDF90, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x000001F19BEF65E0, 16 bytes long.
 Data: <  &#238;&#155;&#241;           > 20 8E EE 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001F19BEE8E20, 320 bytes long.
 Data: <&#224;e&#239;&#155;&#241;    &#223;&#238;&#155;&#241;   > E0 65 EF 9B F1 01 00 00 90 DF EE 9B F1 01 00 00 
{280} normal block at 0x000001F19BEF6360, 16 bytes long.
 Data: < h&#239;&#155;&#241;           > 90 68 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001F19BEF6590, 16 bytes long.
 Data: <hh&#239;&#155;&#241;           > 68 68 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F19BEEDDB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x000001F19BEF5FA0, 16 bytes long.
 Data: <@h&#239;&#155;&#241;           > 40 68 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001F19BEEDAB0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x000001F19BEF5780, 16 bytes long.
 Data: < g&#239;&#155;&#241;           > 88 67 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001F19BEF5A50, 16 bytes long.
 Data: <`g&#239;&#155;&#241;           > 60 67 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F19BEF5910, 16 bytes long.
 Data: <8g&#239;&#155;&#241;           > 38 67 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001F19BEF5BE0, 16 bytes long.
 Data: < g&#239;&#155;&#241;           > 10 67 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F19BEF5960, 16 bytes long.
 Data: <&#232;f&#239;&#155;&#241;           > E8 66 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001F19BEF5F50, 16 bytes long.
 Data: <&#192;f&#239;&#155;&#241;           > C0 66 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001F19BEF5B90, 16 bytes long.
 Data: <@P&#239;&#155;&#241;           > 40 50 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F19BEF5040, 40 bytes long.
 Data: < [&#239;&#155;&#241;    &#191;&#201;&#157;&#241;   > 90 5B EF 9B F1 01 00 00 00 BF C9 9D F1 01 00 00 
{266} normal block at 0x000001F19BEF63B0, 16 bytes long.
 Data: <&#160;f&#239;&#155;&#241;           > A0 66 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001F19BEF5D70, 16 bytes long.
 Data: <xf&#239;&#155;&#241;           > 78 66 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001F19BEED8D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x000001F19BEF5F00, 16 bytes long.
 Data: <Pf&#239;&#155;&#241;           > 50 66 EF 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001F19BEF6650, 992 bytes long.
 Data: < _&#239;&#155;&#241;   &#208;&#216;&#238;&#155;&#241;   > 00 5F EF 9B F1 01 00 00 D0 D8 EE 9B F1 01 00 00 
{98} normal block at 0x000001F19BEED9F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x000001F19BEEFE60, 16 bytes long.
 Data: <&#192;&#225;&#237;&#155;&#241;           > C0 E1 ED 9B F1 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x000001F19BEDE1C0, 40 bytes long.
 Data: <`&#254;&#238;&#155;&#241;   &#240;&#217;&#238;&#155;&#241;   > 60 FE EE 9B F1 01 00 00 F0 D9 EE 9B F1 01 00 00 
{75} normal block at 0x000001F19BEEFBE0, 16 bytes long.
 Data: < &#234;i &#246;           > 80 EA 69 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001F19BEEFE10, 16 bytes long.
 Data: <@&#233;i &#246;           > 40 E9 69 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001F19BEEF910, 16 bytes long.
 Data: <&#248;Wf &#246;           > F8 57 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001F19BEEF730, 16 bytes long.
 Data: <&#216;Wf &#246;           > D8 57 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001F19BEEF4B0, 16 bytes long.
 Data: <P f &#246;           > 50 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001F19BEEF050, 16 bytes long.
 Data: <0 f &#246;           > 30 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F19BEEF2D0, 16 bytes long.
 Data: <&#224; f &#246;           > E0 02 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F19BEEF230, 16 bytes long.
 Data: <  f &#246;           > 10 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F19BEEF460, 16 bytes long.
 Data: <p f &#246;           > 70 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F19BEEF1E0, 16 bytes long.
 Data: < &#192;d &#246;           > 18 C0 64 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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