Task 38679675

Name test_281-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND4185_0
Workunit 31621441
Created 26 Oct 2026, 21:21:29 UTC
Sent 26 Oct 2026, 21:21:35 UTC
Report deadline 31 Oct 2026, 21:21:35 UTC
Received 26 Oct 2026, 23:31:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 464555
Run time 37 min 27 sec
CPU time 36 min 46 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,117.86 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 688.83 MB
Peak swap size 6.85 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:53:51 (14680): wrapper (7.9.26016): starting
23:53:51 (14680): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
23:53:52 (14680): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:53:52 (14680): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\BOINC\ProgramData\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\BOINC\ProgramData\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:30:19 (14680): C:/Windows/system32/cmd.exe exited; CPU time 2206.296875
00:30:19 (14680): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 26442221 bytes.
Dumping objects ->
{3835238} normal block at 0x000002445C3B1250, 48 bytes long.
 Data: <PATH=C:\BOINC\Pr> 50 41 54 48 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835227} normal block at 0x000002445C3B15D0, 48 bytes long.
 Data: <HOME=C:\BOINC\Pr> 48 4F 4D 45 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835216} normal block at 0x000002445C3B1090, 48 bytes long.
 Data: <TMP=C:\BOINC\Pro> 54 4D 50 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 6F 
{3835205} normal block at 0x000002445C3B1170, 48 bytes long.
 Data: <TEMP=C:\BOINC\Pr> 54 45 4D 50 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835194} normal block at 0x000002445C3B0F40, 48 bytes long.
 Data: <TMPDIR=C:\BOINC\> 54 4D 50 44 49 52 3D 43 3A 5C 42 4F 49 4E 43 5C 
{3835163} normal block at 0x000002445C48C610, 64 bytes long.
 Data: <PATH=C:\BOINC\Pr> 50 41 54 48 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835152} normal block at 0x000002445A9AC270, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835149} normal block at 0x000002445A956D70, 8 bytes long.
 Data: <  &#147;ZD   > 00 00 93 5A 44 02 00 00 
{3834546} normal block at 0x000002445A9AC350, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833949} normal block at 0x000002445A9574F0, 8 bytes long.
 Data: <&#240;&#242;&#154;ZD   > F0 F2 9A 5A 44 02 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x000002445A962040, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002445A9461F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x000002445A963990, 16 bytes long.
 Data: <&#184;C&#150;ZD           > B8 43 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002445A9638F0, 16 bytes long.
 Data: < C&#150;ZD           > 90 43 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002445A95C1B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x000002445A9638A0, 16 bytes long.
 Data: <hC&#150;ZD           > 68 43 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002445A963A30, 16 bytes long.
 Data: <@C&#150;ZD           > 40 43 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002445A963620, 16 bytes long.
 Data: < C&#150;ZD           > 18 43 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002445A9635D0, 16 bytes long.
 Data: <&#240;B&#150;ZD           > F0 42 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002445A95E0C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x000002445A963850, 16 bytes long.
 Data: < a&#148;ZD           > 88 61 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002445A95BAF0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x000002445A963580, 16 bytes long.
 Data: <`a&#148;ZD           > 60 61 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002445A963CB0, 16 bytes long.
 Data: <8a&#148;ZD           > 38 61 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002445A963670, 16 bytes long.
 Data: < a&#148;ZD           > 10 61 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002445A963800, 16 bytes long.
 Data: <&#232;`&#148;ZD           > E8 60 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002445A9633F0, 16 bytes long.
 Data: <&#192;`&#148;ZD           > C0 60 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002445A963260, 16 bytes long.
 Data: < `&#148;ZD           > 98 60 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002445A95C2D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{272} normal block at 0x000002445A963210, 16 bytes long.
 Data: <p`&#148;ZD           > 70 60 94 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002445A946070, 320 bytes long.
 Data: < 2&#150;ZD   &#208;&#194;&#149;ZD   > 10 32 96 5A 44 02 00 00 D0 C2 95 5A 44 02 00 00 
{270} normal block at 0x000002445A963DF0, 16 bytes long.
 Data: <&#208;B&#150;ZD           > D0 42 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002445A9634E0, 16 bytes long.
 Data: <&#168;B&#150;ZD           > A8 42 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002445A95C270, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x000002445A963C60, 16 bytes long.
 Data: < B&#150;ZD           > 80 42 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002445A95C630, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x000002445A963A80, 16 bytes long.
 Data: <&#200;A&#150;ZD           > C8 41 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002445A963710, 16 bytes long.
 Data: <&#160;A&#150;ZD           > A0 41 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002445A963440, 16 bytes long.
 Data: <xA&#150;ZD           > 78 41 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002445A9633A0, 16 bytes long.
 Data: <PA&#150;ZD           > 50 41 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002445A963300, 16 bytes long.
 Data: <(A&#150;ZD           > 28 41 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002445A963FD0, 16 bytes long.
 Data: < A&#150;ZD           > 00 41 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002445A9637B0, 16 bytes long.
 Data: <`&#220;&#149;ZD           > 60 DC 95 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002445A95DC60, 40 bytes long.
 Data: <&#176;7&#150;ZD    &#198;H\D   > B0 37 96 5A 44 02 00 00 10 C6 48 5C 44 02 00 00 
{256} normal block at 0x000002445A963940, 16 bytes long.
 Data: <&#224;@&#150;ZD           > E0 40 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002445A9630D0, 16 bytes long.
 Data: <&#184;@&#150;ZD           > B8 40 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000002445A95BA90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x000002445A964020, 16 bytes long.
 Data: < @&#150;ZD           > 90 40 96 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002445A964090, 992 bytes long.
 Data: < @&#150;ZD    &#186;&#149;ZD   > 20 40 96 5A 44 02 00 00 90 BA 95 5A 44 02 00 00 
{88} normal block at 0x000002445A95C570, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x000002445A956D20, 16 bytes long.
 Data: <&#176;&#221;&#149;ZD           > B0 DD 95 5A 44 02 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x000002445A95DDB0, 40 bytes long.
 Data: < m&#149;ZD   p&#197;&#149;ZD   > 20 6D 95 5A 44 02 00 00 70 C5 95 5A 44 02 00 00 
{65} normal block at 0x000002445A956CD0, 16 bytes long.
 Data: < &#234;&#227;i&#247;           > 80 EA E3 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002445A956C80, 16 bytes long.
 Data: <@&#233;&#227;i&#247;           > 40 E9 E3 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002445A957860, 16 bytes long.
 Data: <&#248;W&#224;i&#247;           > F8 57 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002445A956BE0, 16 bytes long.
 Data: <&#216;W&#224;i&#247;           > D8 57 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002445A957400, 16 bytes long.
 Data: <P &#224;i&#247;           > 50 04 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002445A9570E0, 16 bytes long.
 Data: <0 &#224;i&#247;           > 30 04 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002445A9574A0, 16 bytes long.
 Data: <&#224; &#224;i&#247;           > E0 02 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002445A956EB0, 16 bytes long.
 Data: <  &#224;i&#247;           > 10 04 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002445A957A90, 16 bytes long.
 Data: <p &#224;i&#247;           > 70 04 E0 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002445A9578B0, 16 bytes long.
 Data: < &#192;&#222;i&#247;           > 18 C0 DE 69 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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