Task 38679557

Name test_597-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND5344_0
Workunit 31621329
Created 26 Oct 2026, 20:57:37 UTC
Sent 26 Oct 2026, 20:57:42 UTC
Report deadline 31 Oct 2026, 20:57:42 UTC
Received 27 Oct 2026, 19:43:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652367
Run time 58 min 31 sec
CPU time 53 min 44 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 24,724.80 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 739.02 MB
Peak swap size 13.00 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:46:34 (29808): wrapper (7.9.26016): starting
21:46:34 (29808): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:46:36 (29808): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:46:36 (29808): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\25\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\25\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:42:31 (29808): C:/Windows/system32/cmd.exe exited; CPU time 3224.406250
22:42:31 (29808): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 75508031 bytes.
Dumping objects ->
{3835530} normal block at 0x0000017710F6D590, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835519} normal block at 0x0000017710F6D750, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835508} normal block at 0x0000017710F6D4B0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835497} normal block at 0x0000017710F6D0C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835486} normal block at 0x0000017710F6DD00, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835455} normal block at 0x0000017712DB93E0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835444} normal block at 0x0000017712DD2450, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835441} normal block at 0x0000017710F3F880, 8 bytes long.
 Data: <  V w   > 00 00 56 11 77 01 00 00 
{3834698} normal block at 0x0000017712DD2660, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000017710F3F740, 8 bytes long.
 Data: < &#236;&#242; w   > 00 EC F2 10 77 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000017710F3CD40, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000017710F35FB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000017710F4A000, 16 bytes long.
 Data: <X&#172;&#244; w           > 58 AC F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000017710F4A2D0, 16 bytes long.
 Data: <0&#172;&#244; w           > 30 AC F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000017710F44440, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000017710F4A320, 16 bytes long.
 Data: < &#172;&#244; w           > 08 AC F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000017710F4A0F0, 16 bytes long.
 Data: <&#224;&#171;&#244; w           > E0 AB F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000017710F49FB0, 16 bytes long.
 Data: <&#184;&#171;&#244; w           > B8 AB F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000017710F49A60, 16 bytes long.
 Data: < &#171;&#244; w           > 90 AB F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000017710F45AE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000017710F49BA0, 16 bytes long.
 Data: <8&#242;&#242; w           > 38 F2 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000017710F445C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000017710F4A640, 16 bytes long.
 Data: < &#242;&#242; w           > 10 F2 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000017710F4A7D0, 16 bytes long.
 Data: <&#232;&#241;&#242; w           > E8 F1 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000017710F49A10, 16 bytes long.
 Data: <&#192;&#241;&#242; w           > C0 F1 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000017710F49C90, 16 bytes long.
 Data: < &#241;&#242; w           > 98 F1 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000017710F4A460, 16 bytes long.
 Data: <p&#241;&#242; w           > 70 F1 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000017710F4A5F0, 16 bytes long.
 Data: <H&#241;&#242; w           > 48 F1 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000017710F438A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000017710F49CE0, 16 bytes long.
 Data: < &#241;&#242; w           > 20 F1 F2 10 77 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000017710F2F120, 320 bytes long.
 Data: <&#224;&#156;&#244; w   &#160;8&#244; w   > E0 9C F4 10 77 01 00 00 A0 38 F4 10 77 01 00 00 
{280} normal block at 0x0000017710F4A0A0, 16 bytes long.
 Data: <p&#171;&#244; w           > 70 AB F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000017710F4A5A0, 16 bytes long.
 Data: <H&#171;&#244; w           > 48 AB F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000017710F43B40, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000017710F499C0, 16 bytes long.
 Data: < &#171;&#244; w           > 20 AB F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000017710F43A80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000017710F4A1E0, 16 bytes long.
 Data: <h&#170;&#244; w           > 68 AA F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000017710F49970, 16 bytes long.
 Data: <@&#170;&#244; w           > 40 AA F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000017710F4A780, 16 bytes long.
 Data: < &#170;&#244; w           > 18 AA F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000017710F49AB0, 16 bytes long.
 Data: <&#240;&#169;&#244; w           > F0 A9 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000017710F49DD0, 16 bytes long.
 Data: <&#200;&#169;&#244; w           > C8 A9 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000017710F4A190, 16 bytes long.
 Data: <&#160;&#169;&#244; w           > A0 A9 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000017710F4A410, 16 bytes long.
 Data: <&#208;W&#244; w           > D0 57 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000017710F457D0, 40 bytes long.
 Data: < &#164;&#244; w   &#224;&#147;&#219; w   > 10 A4 F4 10 77 01 00 00 E0 93 DB 12 77 01 00 00 
{266} normal block at 0x0000017710F4A230, 16 bytes long.
 Data: < &#169;&#244; w           > 80 A9 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000017710F4A3C0, 16 bytes long.
 Data: <X&#169;&#244; w           > 58 A9 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000017710F43D20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000017710F4A730, 16 bytes long.
 Data: <0&#169;&#244; w           > 30 A9 F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000017710F4A930, 992 bytes long.
 Data: <0&#167;&#244; w    =&#244; w   > 30 A7 F4 10 77 01 00 00 20 3D F4 10 77 01 00 00 
{98} normal block at 0x0000017710F43CC0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000017710F403C0, 16 bytes long.
 Data: < ]&#244; w           > 80 5D F4 10 77 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000017710F45D80, 40 bytes long.
 Data: <&#192; &#244; w   &#192;<&#244; w   > C0 03 F4 10 77 01 00 00 C0 3C F4 10 77 01 00 00 
{75} normal block at 0x0000017710F40370, 16 bytes long.
 Data: < &#234; Z&#247;           > 80 EA 19 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000017710F40280, 16 bytes long.
 Data: <@&#233; Z&#247;           > 40 E9 19 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000017710F40230, 16 bytes long.
 Data: <&#248;W Z&#247;           > F8 57 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000017710F40190, 16 bytes long.
 Data: <&#216;W Z&#247;           > D8 57 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000017710F40320, 16 bytes long.
 Data: <P  Z&#247;           > 50 04 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000017710F3FF60, 16 bytes long.
 Data: <0  Z&#247;           > 30 04 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000017710F401E0, 16 bytes long.
 Data: <&#224;  Z&#247;           > E0 02 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000017710F3FEC0, 16 bytes long.
 Data: <   Z&#247;           > 10 04 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000017710F3FE70, 16 bytes long.
 Data: <p  Z&#247;           > 70 04 16 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000017710F402D0, 16 bytes long.
 Data: < &#192; Z&#247;           > 18 C0 14 5A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra