Task 38679454

Name test_691-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND5794_0
Workunit 31621228
Created 26 Oct 2026, 20:37:22 UTC
Sent 26 Oct 2026, 20:37:25 UTC
Report deadline 31 Oct 2026, 20:37:25 UTC
Received 26 Oct 2026, 22:07:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 623100
Run time 24 min 59 sec
CPU time 23 min 14 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 31,239.72 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 778.64 MB
Peak swap size 9.98 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
23:42:41 (20896): wrapper (7.9.26016): starting
23:42:41 (20896): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
23:42:43 (20896): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:42:43 (20896): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:06:53 (20896): C:/Windows/system32/cmd.exe exited; CPU time 1394.843750
00:06:53 (20896): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 22468849 bytes.
Dumping objects ->
{3835317} normal block at 0x0000021B86E26BA0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835306} normal block at 0x0000021B86E26AC0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835295} normal block at 0x0000021B86E26D60, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835284} normal block at 0x0000021B86E269E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835273} normal block at 0x0000021B86E26900, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835242} normal block at 0x0000021B88BF9050, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835231} normal block at 0x0000021B88C10460, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835228} normal block at 0x0000021B86E1ECD0, 8 bytes long.
 Data: <  1&#135;    > 00 00 31 87 1B 02 00 00 
{3834592} normal block at 0x0000021B88C10B40, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000021B86E1F770, 8 bytes long.
 Data: <&#160;T&#197;     > A0 54 C5 88 1B 02 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000021B86E23140, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000021B86E172D0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000021B86E275A0, 16 bytes long.
 Data: <  &#226;&#134;            > 08 83 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000021B86E27DC0, 16 bytes long.
 Data: <&#224;&#130;&#226;&#134;            > E0 82 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000021B86E213B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000021B86E272D0, 16 bytes long.
 Data: <&#184;&#130;&#226;&#134;            > B8 82 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000021B86E276E0, 16 bytes long.
 Data: < &#130;&#226;&#134;            > 90 82 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000021B86E27730, 16 bytes long.
 Data: <h&#130;&#226;&#134;            > 68 82 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000021B86E27C80, 16 bytes long.
 Data: <@&#130;&#226;&#134;            > 40 82 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000021B86E26890, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000021B86E27190, 16 bytes long.
 Data: <  &#226;&#134;            > 98 05 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000021B86E20B70, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000021B86E26E70, 16 bytes long.
 Data: <p &#226;&#134;            > 70 05 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000021B86E27CD0, 16 bytes long.
 Data: <H &#226;&#134;            > 48 05 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000021B86E27230, 16 bytes long.
 Data: <  &#226;&#134;            > 20 05 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000021B86E26EC0, 16 bytes long.
 Data: <&#248; &#226;&#134;            > F8 04 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000021B86E27C30, 16 bytes long.
 Data: <&#208; &#226;&#134;            > D0 04 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000021B86E27960, 16 bytes long.
 Data: <&#168; &#226;&#134;            > A8 04 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000021B86E20C30, 32 bytes long.
 Data: <CUDA_DEVICE=1 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 31 00 50 55 
{282} normal block at 0x0000021B86E27BE0, 16 bytes long.
 Data: <  &#226;&#134;            > 80 04 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000021B86E20480, 320 bytes long.
 Data: <&#224;{&#226;&#134;    0 &#226;&#134;    > E0 7B E2 86 1B 02 00 00 30 0C E2 86 1B 02 00 00 
{280} normal block at 0x0000021B86E27D70, 16 bytes long.
 Data: < &#130;&#226;&#134;            > 20 82 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000021B86E27AF0, 16 bytes long.
 Data: <&#248; &#226;&#134;            > F8 81 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000021B86E21170, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000021B86E271E0, 16 bytes long.
 Data: <&#208; &#226;&#134;            > D0 81 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000021B86E21530, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000021B86E27500, 16 bytes long.
 Data: <  &#226;&#134;            > 18 81 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000021B86E27870, 16 bytes long.
 Data: <&#240; &#226;&#134;            > F0 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000021B86E27B40, 16 bytes long.
 Data: <&#200; &#226;&#134;            > C8 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000021B86E278C0, 16 bytes long.
 Data: <&#160; &#226;&#134;            > A0 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000021B86E27820, 16 bytes long.
 Data: <x &#226;&#134;            > 78 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000021B86E277D0, 16 bytes long.
 Data: <P &#226;&#134;            > 50 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000021B86E27B90, 16 bytes long.
 Data: <&#240;l&#226;&#134;            > F0 6C E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000021B86E26CF0, 40 bytes long.
 Data: < {&#226;&#134;    P &#191;     > 90 7B E2 86 1B 02 00 00 50 90 BF 88 1B 02 00 00 
{266} normal block at 0x0000021B86E26F60, 16 bytes long.
 Data: <0 &#226;&#134;            > 30 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000021B86E26FB0, 16 bytes long.
 Data: <  &#226;&#134;            > 08 80 E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000021B86E206F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000021B86E27140, 16 bytes long.
 Data: <&#224; &#226;&#134;            > E0 7F E2 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000021B86E27FE0, 992 bytes long.
 Data: <@q&#226;&#134;    &#240; &#226;&#134;    > 40 71 E2 86 1B 02 00 00 F0 06 E2 86 1B 02 00 00 
{98} normal block at 0x0000021B86E212F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000021B86E1EAF0, 16 bytes long.
 Data: < &#234;&#224;&#134;            > 00 EA E0 86 1B 02 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000021B86E0EA00, 40 bytes long.
 Data: <&#240;&#234;&#225;&#134;    &#240; &#226;&#134;    > F0 EA E1 86 1B 02 00 00 F0 12 E2 86 1B 02 00 00 
{75} normal block at 0x0000021B86E1F310, 16 bytes long.
 Data: < &#234;i &#246;           > 80 EA 69 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000021B86E1F680, 16 bytes long.
 Data: <@&#233;i &#246;           > 40 E9 69 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000021B86E1F090, 16 bytes long.
 Data: <&#248;Wf &#246;           > F8 57 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000021B86E1F630, 16 bytes long.
 Data: <&#216;Wf &#246;           > D8 57 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000021B86E1F220, 16 bytes long.
 Data: <P f &#246;           > 50 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000021B86E1F540, 16 bytes long.
 Data: <0 f &#246;           > 30 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000021B86E1F1D0, 16 bytes long.
 Data: <&#224; f &#246;           > E0 02 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000021B86E1F5E0, 16 bytes long.
 Data: <  f &#246;           > 10 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000021B86E1F720, 16 bytes long.
 Data: <p f &#246;           > 70 04 66 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000021B86E1F4F0, 16 bytes long.
 Data: < &#192;d &#246;           > 18 C0 64 98 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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