Task 38679446

Name test_213-GPUGRID_TEST_ATM_40STEP_20261023-17-40-RND4161_0
Workunit 31621220
Created 26 Oct 2026, 20:36:27 UTC
Sent 26 Oct 2026, 20:36:34 UTC
Report deadline 31 Oct 2026, 20:36:34 UTC
Received 27 Oct 2026, 4:30:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 639498
Run time 2 hours 0 min 25 sec
CPU time 1 hours 41 min 38 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 4,085.14 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 643.72 MB
Peak swap size 2.20 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
20:32:06 (9928): wrapper (7.9.26016): starting
20:32:06 (9928): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
20:32:09 (9928): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:32:09 (9928): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:30:08 (9928): C:/Windows/system32/cmd.exe exited; CPU time 6098.765625
22:30:08 (9928): called boinc_finish(0)
0 bytes in 0 Free Blocks.
726 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 78013905 bytes.
Dumping objects ->
{3835279} normal block at 0x000002BBBAA60C30, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835268} normal block at 0x000002BBBAA612C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835257} normal block at 0x000002BBBAA60BC0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835246} normal block at 0x000002BBBAA60A00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835235} normal block at 0x000002BBBAA61640, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835204} normal block at 0x000002BBBAB0BF00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835193} normal block at 0x000002BBB9062940, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835190} normal block at 0x000002BBB9056EB0, 8 bytes long.
 Data: <  &#255;&#184;&#187;   > 00 00 FF B8 BB 02 00 00 
{3834573} normal block at 0x000002BBB9062F30, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833945} normal block at 0x000002BBB9056E60, 8 bytes long.
 Data: <&#160; &#176;&#186;&#187;   > A0 1D B0 BA BB 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000002BBB9060160, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002BBB90610A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002BBB90620F0, 16 bytes long.
 Data: < 8 &#185;&#187;           > 98 38 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002BBB90617E0, 16 bytes long.
 Data: <p8 &#185;&#187;           > 70 38 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002BBB905D3B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002BBB9061790, 16 bytes long.
 Data: <H8 &#185;&#187;           > 48 38 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002BBB90615B0, 16 bytes long.
 Data: < 8 &#185;&#187;           > 20 38 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002BBB9061E70, 16 bytes long.
 Data: <&#248;7 &#185;&#187;           > F8 37 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002BBB9061A60, 16 bytes long.
 Data: <&#208;7 &#185;&#187;           > D0 37 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002BBB905CC30, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002BBB9061740, 16 bytes long.
 Data: <8  &#185;&#187;           > 38 10 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002BBB905D470, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002BBB90616A0, 16 bytes long.
 Data: <   &#185;&#187;           > 10 10 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002BBB9061F60, 16 bytes long.
 Data: <&#232;  &#185;&#187;           > E8 0F 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002BBB9061560, 16 bytes long.
 Data: <&#192;  &#185;&#187;           > C0 0F 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002BBB9061510, 16 bytes long.
 Data: <   &#185;&#187;           > 98 0F 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002BBB90616F0, 16 bytes long.
 Data: <p  &#185;&#187;           > 70 0F 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002BBB9061E20, 16 bytes long.
 Data: <H  &#185;&#187;           > 48 0F 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002BBB905DB30, 32 bytes long.
 Data: <CUDA_DEVICE=2 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 32 00 50 55 
{270} normal block at 0x000002BBB9062000, 16 bytes long.
 Data: <   &#185;&#187;           > 20 0F 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002BBB9060F20, 320 bytes long.
 Data: <   &#185;&#187;   0&#219; &#185;&#187;   > 00 20 06 B9 BB 02 00 00 30 DB 05 B9 BB 02 00 00 
{268} normal block at 0x000002BBB9061DD0, 16 bytes long.
 Data: <&#176;7 &#185;&#187;           > B0 37 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002BBB9061D80, 16 bytes long.
 Data: < 7 &#185;&#187;           > 88 37 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002BBB905DC50, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002BBB9061FB0, 16 bytes long.
 Data: <`7 &#185;&#187;           > 60 37 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002BBB905D650, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002BBB9061600, 16 bytes long.
 Data: <&#168;6 &#185;&#187;           > A8 36 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002BBB9061D30, 16 bytes long.
 Data: < 6 &#185;&#187;           > 80 36 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002BBB90614C0, 16 bytes long.
 Data: <X6 &#185;&#187;           > 58 36 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002BBB9062050, 16 bytes long.
 Data: <06 &#185;&#187;           > 30 36 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002BBB9061240, 16 bytes long.
 Data: < 6 &#185;&#187;           > 08 36 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002BBB90611A0, 16 bytes long.
 Data: <&#224;5 &#185;&#187;           > E0 35 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002BBB9061F10, 16 bytes long.
 Data: <&#192;&#203; &#185;&#187;           > C0 CB 05 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002BBB905CBC0, 40 bytes long.
 Data: <   &#185;&#187;    &#191;&#176;&#186;&#187;   > 10 1F 06 B9 BB 02 00 00 00 BF B0 BA BB 02 00 00 
{254} normal block at 0x000002BBB9061470, 16 bytes long.
 Data: <&#192;5 &#185;&#187;           > C0 35 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002BBB9061A10, 16 bytes long.
 Data: < 5 &#185;&#187;           > 98 35 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002BBB905D5F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002BBB9061420, 16 bytes long.
 Data: <p5 &#185;&#187;           > 70 35 06 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002BBB9063570, 992 bytes long.
 Data: <   &#185;&#187;   &#240;&#213; &#185;&#187;   > 20 14 06 B9 BB 02 00 00 F0 D5 05 B9 BB 02 00 00 
{86} normal block at 0x000002BBB905DDD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002BBB9056870, 16 bytes long.
 Data: <P&#203; &#185;&#187;           > 50 CB 05 B9 BB 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002BBB905CB50, 40 bytes long.
 Data: <ph &#185;&#187;   &#208;&#221; &#185;&#187;   > 70 68 05 B9 BB 02 00 00 D0 DD 05 B9 BB 02 00 00 
{63} normal block at 0x000002BBB9056820, 16 bytes long.
 Data: < &#234;&#237;f&#247;           > 80 EA ED 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002BBB90573B0, 16 bytes long.
 Data: <@&#233;&#237;f&#247;           > 40 E9 ED 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002BBB9056780, 16 bytes long.
 Data: <&#248;W&#234;f&#247;           > F8 57 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002BBB9056A50, 16 bytes long.
 Data: <&#216;W&#234;f&#247;           > D8 57 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002BBB9057090, 16 bytes long.
 Data: <P &#234;f&#247;           > 50 04 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002BBB9056640, 16 bytes long.
 Data: <0 &#234;f&#247;           > 30 04 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002BBB9057360, 16 bytes long.
 Data: <&#224; &#234;f&#247;           > E0 02 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002BBB90565F0, 16 bytes long.
 Data: <  &#234;f&#247;           > 10 04 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002BBB9056A00, 16 bytes long.
 Data: <p &#234;f&#247;           > 70 04 EA 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002BBB9056D20, 16 bytes long.
 Data: < &#192;&#232;f&#247;           > 18 C0 E8 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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