Task 38679402

Name test_463-GPUGRID_TEST_ATM_40STEP_20261023-5-40-RND0269_0
Workunit 31621178
Created 26 Oct 2026, 20:26:19 UTC
Sent 26 Oct 2026, 20:26:20 UTC
Report deadline 31 Oct 2026, 20:26:20 UTC
Received 26 Oct 2026, 22:44:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648712
Run time 47 min 4 sec
CPU time 47 min 4 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,710.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 642.40 MB
Peak swap size 6.75 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
05:56:57 (30340): wrapper (7.9.26016): starting
05:56:57 (30340): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
05:56:58 (30340): Library/usr/bin/tar.exe exited; CPU time 0.015625
05:56:58 (30340): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
06:43:13 (30340): C:/Windows/system32/cmd.exe exited; CPU time 2824.171875
06:43:13 (30340): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 44862023 bytes.
Dumping objects ->
{3835255} normal block at 0x0000020D4562C1E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835244} normal block at 0x0000020D4562C020, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x0000020D4562C3A0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835222} normal block at 0x0000020D4562BB50, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x0000020D4562BCA0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835180} normal block at 0x0000020D48E00E50, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835167} normal block at 0x0000020D45628AD0, 8 bytes long.
 Data: <   G    > 00 00 03 47 0D 02 00 00 
{3834025} normal block at 0x0000020D45629480, 8 bytes long.
 Data: <  oE    > E0 DA 6F 45 0D 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x0000020D45626FC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000020D4560B7B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x0000020D45628A80, 16 bytes long.
 Data: <  bE            > C8 85 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000020D45628FD0, 16 bytes long.
 Data: <  bE            > A0 85 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000020D45622C00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x0000020D45628760, 16 bytes long.
 Data: <x bE            > 78 85 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000020D45628990, 16 bytes long.
 Data: <P bE            > 50 85 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000020D45628C60, 16 bytes long.
 Data: <( bE            > 28 85 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000020D45629390, 16 bytes long.
 Data: <  bE            > 00 85 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000020D45620FB0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x0000020D456294D0, 16 bytes long.
 Data: <  bE            > D8 7F 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000020D45622360, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x0000020D456249F0, 16 bytes long.
 Data: <  bE            > B0 7F 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000020D456247C0, 16 bytes long.
 Data: <  bE            > 88 7F 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000020D456249A0, 16 bytes long.
 Data: <` bE            > 60 7F 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000020D45624810, 16 bytes long.
 Data: <8 bE            > 38 7F 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000020D45624540, 16 bytes long.
 Data: <  bE            > 10 7F 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000020D45624400, 16 bytes long.
 Data: < ~bE            > E8 7E 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000020D45622A20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x0000020D45624770, 16 bytes long.
 Data: < ~bE            > C0 7E 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000020D45627EC0, 320 bytes long.
 Data: <pGbE     *bE    > 70 47 62 45 0D 02 00 00 20 2A 62 45 0D 02 00 00 
{268} normal block at 0x0000020D456242C0, 16 bytes long.
 Data: <  bE            > E0 84 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000020D45624270, 16 bytes long.
 Data: <  bE            > B8 84 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000020D45622DE0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x0000020D45624E00, 16 bytes long.
 Data: <  bE            > 90 84 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000020D45621FA0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x0000020D45624630, 16 bytes long.
 Data: <  bE            > D8 83 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000020D45624590, 16 bytes long.
 Data: <  bE            > B0 83 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000020D456243B0, 16 bytes long.
 Data: <  bE            > 88 83 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000020D45624360, 16 bytes long.
 Data: <` bE            > 60 83 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000020D45624180, 16 bytes long.
 Data: <8 bE            > 38 83 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000020D45624720, 16 bytes long.
 Data: <  bE            > 10 83 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000020D45624130, 16 bytes long.
 Data: <  bE            > D0 0E 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000020D45620ED0, 40 bytes long.
 Data: <0AbE    P  H    > 30 41 62 45 0D 02 00 00 50 0E E0 48 0D 02 00 00 
{254} normal block at 0x0000020D45624F40, 16 bytes long.
 Data: <  bE            > F0 82 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000020D456244F0, 16 bytes long.
 Data: <  bE            > C8 82 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x0000020D45622420, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x0000020D45624D60, 16 bytes long.
 Data: <  bE            > A0 82 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x0000020D456282A0, 992 bytes long.
 Data: <`MbE     $bE    > 60 4D 62 45 0D 02 00 00 20 24 62 45 0D 02 00 00 
{86} normal block at 0x0000020D45622840, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x0000020D456241D0, 16 bytes long.
 Data: <` bE            > 60 15 62 45 0D 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x0000020D45621560, 40 bytes long.
 Data: < AbE    @(bE    > D0 41 62 45 0D 02 00 00 40 28 62 45 0D 02 00 00 
{61} normal block at 0x0000020D45624860, 16 bytes long.
 Data: <  4             > 80 EA 34 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000020D456244A0, 16 bytes long.
 Data: <@ 4             > 40 E9 34 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000020D45624C70, 16 bytes long.
 Data: < W1             > F8 57 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000020D45623FF0, 16 bytes long.
 Data: < W1             > D8 57 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000020D45624EA0, 16 bytes long.
 Data: <P 1             > 50 04 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000020D45624B30, 16 bytes long.
 Data: <0 1             > 30 04 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000020D45624310, 16 bytes long.
 Data: <  1             > E0 02 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x0000020D45624AE0, 16 bytes long.
 Data: <  1             > 10 04 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x0000020D456246D0, 16 bytes long.
 Data: <p 1             > 70 04 31 A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x0000020D456248B0, 16 bytes long.
 Data: <  /             > 18 C0 2F A9 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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