Task 38679369

Name test_717-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND8342_0
Workunit 31621145
Created 26 Oct 2026, 20:18:57 UTC
Sent 26 Oct 2026, 20:19:01 UTC
Report deadline 31 Oct 2026, 20:19:01 UTC
Received 26 Oct 2026, 21:02:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 464557
Run time 28 min 14 sec
CPU time 26 min 52 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 10,072.10 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 660.06 MB
Peak swap size 3.75 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:34:01 (5536): wrapper (7.9.26016): starting
21:34:01 (5536): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:34:02 (5536): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:34:02 (5536): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\BOINC\ProgramData\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\BOINC\ProgramData\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:01:13 (5536): C:/Windows/system32/cmd.exe exited; CPU time 1612.734375
22:01:13 (5536): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 19899055 bytes.
Dumping objects ->
{3835241} normal block at 0x0000018E112A1350, 48 bytes long.
 Data: <PATH=C:\BOINC\Pr> 50 41 54 48 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835230} normal block at 0x0000018E112A15F0, 48 bytes long.
 Data: <HOME=C:\BOINC\Pr> 48 4F 4D 45 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835219} normal block at 0x0000018E112A12E0, 48 bytes long.
 Data: <TMP=C:\BOINC\Pro> 54 4D 50 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 6F 
{3835208} normal block at 0x0000018E112A1270, 48 bytes long.
 Data: <TEMP=C:\BOINC\Pr> 54 45 4D 50 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835197} normal block at 0x0000018E112A1890, 48 bytes long.
 Data: <TMPDIR=C:\BOINC\> 54 4D 50 44 49 52 3D 43 3A 5C 42 4F 49 4E 43 5C 
{3835166} normal block at 0x0000018E1134D190, 64 bytes long.
 Data: <PATH=C:\BOINC\Pr> 50 41 54 48 3D 43 3A 5C 42 4F 49 4E 43 5C 50 72 
{3835155} normal block at 0x0000018E114648C0, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835152} normal block at 0x0000018E0F836D90, 8 bytes long.
 Data: <    &#142;   > 00 00 80 0F 8E 01 00 00 
{3834548} normal block at 0x0000018E11464A80, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x0000018E0F837600, 8 bytes long.
 Data: <&#224;Z* &#142;   > E0 5A 2A 11 8E 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x0000018E0F8420C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000018E0F826300, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x0000018E0F843470, 16 bytes long.
 Data: <hC&#132; &#142;           > 68 43 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000018E0F843420, 16 bytes long.
 Data: <@C&#132; &#142;           > 40 43 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000018E0F83C010, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x0000018E0F843E20, 16 bytes long.
 Data: < C&#132; &#142;           > 18 43 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000018E0F8433D0, 16 bytes long.
 Data: <&#240;B&#132; &#142;           > F0 42 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000018E0F843D80, 16 bytes long.
 Data: <&#200;B&#132; &#142;           > C8 42 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000018E0F843560, 16 bytes long.
 Data: <&#160;B&#132; &#142;           > A0 42 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000018E0F83DE70, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x0000018E0F843DD0, 16 bytes long.
 Data: < b&#130; &#142;           > 98 62 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000018E0F83BFB0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x0000018E0F843AB0, 16 bytes long.
 Data: <pb&#130; &#142;           > 70 62 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000018E0F843290, 16 bytes long.
 Data: <Hb&#130; &#142;           > 48 62 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000018E0F843BA0, 16 bytes long.
 Data: < b&#130; &#142;           > 20 62 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000018E0F843830, 16 bytes long.
 Data: <&#248;a&#130; &#142;           > F8 61 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000018E0F843D30, 16 bytes long.
 Data: <&#208;a&#130; &#142;           > D0 61 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000018E0F8431A0, 16 bytes long.
 Data: <&#168;a&#130; &#142;           > A8 61 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000018E0F83BD10, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x0000018E0F843240, 16 bytes long.
 Data: < a&#130; &#142;           > 80 61 82 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000018E0F826180, 320 bytes long.
 Data: <@2&#132; &#142;    &#189;&#131; &#142;   > 40 32 84 0F 8E 01 00 00 10 BD 83 0F 8E 01 00 00 
{271} normal block at 0x0000018E0F843A60, 16 bytes long.
 Data: < B&#132; &#142;           > 80 42 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000018E0F843330, 16 bytes long.
 Data: <XB&#132; &#142;           > 58 42 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000018E0F83BDD0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x0000018E0F843CE0, 16 bytes long.
 Data: <0B&#132; &#142;           > 30 42 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000018E0F83C550, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x0000018E0F843150, 16 bytes long.
 Data: <xA&#132; &#142;           > 78 41 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000018E0F843380, 16 bytes long.
 Data: <PA&#132; &#142;           > 50 41 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000018E0F8430B0, 16 bytes long.
 Data: <(A&#132; &#142;           > 28 41 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000018E0F8437E0, 16 bytes long.
 Data: < A&#132; &#142;           > 00 41 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000018E0F843100, 16 bytes long.
 Data: <&#216;@&#132; &#142;           > D8 40 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000018E0F843740, 16 bytes long.
 Data: <&#176;@&#132; &#142;           > B0 40 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000018E0F843A10, 16 bytes long.
 Data: < &#222;&#131; &#142;           > 00 DE 83 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000018E0F83DE00, 40 bytes long.
 Data: < :&#132; &#142;    &#209;4 &#142;   > 10 3A 84 0F 8E 01 00 00 90 D1 34 11 8E 01 00 00 
{257} normal block at 0x0000018E0F8439C0, 16 bytes long.
 Data: < @&#132; &#142;           > 90 40 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000018E0F843970, 16 bytes long.
 Data: <h@&#132; &#142;           > 68 40 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000018E0F83C850, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x0000018E0F843920, 16 bytes long.
 Data: <@@&#132; &#142;           > 40 40 84 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000018E0F844040, 992 bytes long.
 Data: < 9&#132; &#142;   P&#200;&#131; &#142;   > 20 39 84 0F 8E 01 00 00 50 C8 83 0F 8E 01 00 00 
{89} normal block at 0x0000018E0F83C310, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x0000018E0F837C40, 16 bytes long.
 Data: <&#176;&#220;&#131; &#142;           > B0 DC 83 0F 8E 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x0000018E0F83DCB0, 40 bytes long.
 Data: <@|&#131; &#142;    &#195;&#131; &#142;   > 40 7C 83 0F 8E 01 00 00 10 C3 83 0F 8E 01 00 00 
{66} normal block at 0x0000018E0F8376A0, 16 bytes long.
 Data: < &#234;&#238;&#224;&#247;           > 80 EA EE E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000018E0F837B50, 16 bytes long.
 Data: <@&#233;&#238;&#224;&#247;           > 40 E9 EE E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000018E0F837B00, 16 bytes long.
 Data: <&#248;W&#235;&#224;&#247;           > F8 57 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000018E0F8379C0, 16 bytes long.
 Data: <&#216;W&#235;&#224;&#247;           > D8 57 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000018E0F8376F0, 16 bytes long.
 Data: <P &#235;&#224;&#247;           > 50 04 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000018E0F837510, 16 bytes long.
 Data: <0 &#235;&#224;&#247;           > 30 04 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000018E0F837AB0, 16 bytes long.
 Data: <&#224; &#235;&#224;&#247;           > E0 02 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000018E0F8377E0, 16 bytes long.
 Data: <  &#235;&#224;&#247;           > 10 04 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000018E0F837650, 16 bytes long.
 Data: <p &#235;&#224;&#247;           > 70 04 EB E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000018E0F836D40, 16 bytes long.
 Data: < &#192;&#233;&#224;&#247;           > 18 C0 E9 E0 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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