Task 38679180

Name test_161-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND4030_0
Workunit 31620971
Created 26 Oct 2026, 19:42:29 UTC
Sent 26 Oct 2026, 19:42:37 UTC
Report deadline 31 Oct 2026, 19:42:37 UTC
Received 26 Oct 2026, 20:10:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654060
Run time 25 min 18 sec
CPU time 24 min 36 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 23,707.18 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 731.77 MB
Peak swap size 8.40 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:44:43 (32720): wrapper (7.9.26016): starting
14:44:43 (32720): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:44:44 (32720): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:44:44 (32720): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835170} normal block at 0x00000221E0F7F4E0, 8 bytes long.
 Data: <    !   > 00 00 F4 E0 21 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3833958} normal block at 0x00000221E2CF8040, 1080 bytes long.
 Data: <8               > 38 CD 00 00 CD CD CD CD 08 02 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x00000221E0F80BF0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
14:44:54 (31476): wrapper (7.9.26016): starting
14:44:54 (31476): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:10:11 (31476): C:/Windows/system32/cmd.exe exited; CPU time 1476.781250
15:10:11 (31476): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 42164378 bytes.
Dumping objects ->
{1604} normal block at 0x000001F87A484BC0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1593} normal block at 0x000001F87A484B50, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1582} normal block at 0x000001F87A484AE0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1571} normal block at 0x000001F87A484A70, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1560} normal block at 0x000001F87A484DF0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1529} normal block at 0x000001F87A46B610, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {1516} normal block at 0x000001F87A4866B0, 8 bytes long.
 Data: <   z    > 00 00 AC 7A F8 01 00 00 
{305} normal block at 0x000001F87A486890, 8 bytes long.
 Data: < iHz    > 00 69 48 7A F8 01 00 00 
{296} normal block at 0x000001F87A476D10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001F87A485DA0, 16 bytes long.
 Data: < WHz            > F8 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F87A486660, 16 bytes long.
 Data: < WHz            > D0 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F87A47F8F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001F87A486610, 16 bytes long.
 Data: < WHz            > A8 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001F87A486390, 16 bytes long.
 Data: < WHz            > 80 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001F87A486250, 16 bytes long.
 Data: <XWHz            > 58 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001F87A486020, 16 bytes long.
 Data: <0WHz            > 30 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001F87A484A00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001F87A486840, 16 bytes long.
 Data: <  Gz            > E8 90 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F87A480730, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001F87A486430, 16 bytes long.
 Data: <  Gz            > C0 90 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F87A4867A0, 16 bytes long.
 Data: <  Gz            > 98 90 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001F87A485D00, 16 bytes long.
 Data: <p Gz            > 70 90 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001F87A485E40, 16 bytes long.
 Data: <H Gz            > 48 90 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001F87A4864D0, 16 bytes long.
 Data: <  Gz            > 20 90 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001F87A486480, 16 bytes long.
 Data: <  Gz            > F8 8F 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F87A47FEF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001F87A485B20, 16 bytes long.
 Data: <  Gz            > D0 8F 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001F87A478FD0, 320 bytes long.
 Data: < [Hz      Gz    > 20 5B 48 7A F8 01 00 00 F0 FE 47 7A F8 01 00 00 
{275} normal block at 0x000001F87A486160, 16 bytes long.
 Data: < WHz            > 10 57 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001F87A485FD0, 16 bytes long.
 Data: < VHz            > E8 56 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F87A4802B0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001F87A4865C0, 16 bytes long.
 Data: < VHz            > C0 56 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F87A480310, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001F87A485F80, 16 bytes long.
 Data: < VHz            > 08 56 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001F87A485F30, 16 bytes long.
 Data: < UHz            > E0 55 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001F87A485A80, 16 bytes long.
 Data: < UHz            > B8 55 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F87A486520, 16 bytes long.
 Data: < UHz            > 90 55 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001F87A486750, 16 bytes long.
 Data: <hUHz            > 68 55 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001F87A47EA00, 16 bytes long.
 Data: <@UHz            > 40 55 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001F87A47E870, 16 bytes long.
 Data: < MHz            > 10 4D 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001F87A484D10, 40 bytes long.
 Data: <p Gz      Fz    > 70 E8 47 7A F8 01 00 00 10 B6 46 7A F8 01 00 00 
{261} normal block at 0x000001F87A47F090, 16 bytes long.
 Data: < UHz            > 20 55 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001F87A47E820, 16 bytes long.
 Data: < THz            > F8 54 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001F87A4806D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001F87A47F770, 16 bytes long.
 Data: < THz            > D0 54 48 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001F87A4854D0, 992 bytes long.
 Data: <p Gz      Hz    > 70 F7 47 7A F8 01 00 00 D0 06 48 7A F8 01 00 00 
{93} normal block at 0x000001F87A480670, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001F87A47EB40, 16 bytes long.
 Data: <  Gz            > 20 E7 47 7A F8 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001F87A47E720, 40 bytes long.
 Data: <@ Gz    p Hz    > 40 EB 47 7A F8 01 00 00 70 06 48 7A F8 01 00 00 
{70} normal block at 0x000001F87A47F2C0, 16 bytes long.
 Data: <                > 80 EA 97 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F87A47F220, 16 bytes long.
 Data: <@               > 40 E9 97 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F87A47F270, 16 bytes long.
 Data: < W              > F8 57 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F87A47E9B0, 16 bytes long.
 Data: < W              > D8 57 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F87A47F1D0, 16 bytes long.
 Data: <P               > 50 04 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001F87A47EF50, 16 bytes long.
 Data: <0               > 30 04 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001F87A47ECD0, 16 bytes long.
 Data: <                > E0 02 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001F87A47EBE0, 16 bytes long.
 Data: <                > 10 04 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001F87A47F180, 16 bytes long.
 Data: <p               > 70 04 94 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001F87A47EF00, 16 bytes long.
 Data: <                > 18 C0 92 C5 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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