Task 38679117

Name test_309-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND1013_0
Workunit 31620908
Created 26 Oct 2026, 19:31:12 UTC
Sent 26 Oct 2026, 19:31:19 UTC
Report deadline 31 Oct 2026, 19:31:19 UTC
Received 26 Oct 2026, 21:48:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 634205
Run time 1 hours 1 min 10 sec
CPU time 59 min 42 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 7,990.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 763.11 MB
Peak swap size 12.94 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:48:50 (42560): wrapper (7.9.26016): starting
07:48:50 (42560): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:48:51 (42560): Library/usr/bin/tar.exe exited; CPU time 0.031250
07:48:51 (42560): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\15\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\15\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:48:18 (42560): C:/Windows/system32/cmd.exe exited; CPU time 3582.468750
08:48:18 (42560): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 77383567 bytes.
Dumping objects ->
{3835521} normal block at 0x00000165AB8E9380, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835510} normal block at 0x00000165AB8E8F90, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835499} normal block at 0x00000165AB8E9460, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835488} normal block at 0x00000165AB8E93F0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835477} normal block at 0x00000165AB8E9310, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835446} normal block at 0x00000165AD5B5D70, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835433} normal block at 0x00000165AB8C1430, 8 bytes long.
 Data: <  &#134;&#171;e   > 00 00 86 AB 65 01 00 00 
{3833971} normal block at 0x00000165AB8C0A80, 8 bytes long.
 Data: <&#240;jd&#173;e   > F0 6A 64 AD 65 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x00000165AB8B6DC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x00000165AB8B7B50, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x00000165AB8C6130, 16 bytes long.
 Data: <Xf&#140;&#171;e           > 58 66 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x00000165AB8C5EB0, 16 bytes long.
 Data: <0f&#140;&#171;e           > 30 66 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000165AB8BFFA0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x00000165AB8C53C0, 16 bytes long.
 Data: < f&#140;&#171;e           > 08 66 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000165AB8C5E10, 16 bytes long.
 Data: <&#224;e&#140;&#171;e           > E0 65 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000165AB8C5F50, 16 bytes long.
 Data: <&#184;e&#140;&#171;e           > B8 65 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000165AB8C5640, 16 bytes long.
 Data: < e&#140;&#171;e           > 90 65 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000165AB8BE5A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x00000165AB8C60E0, 16 bytes long.
 Data: <8&#254;&#138;&#171;e           > 38 FE 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000165AB8C0660, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x00000165AB8C5370, 16 bytes long.
 Data: < &#254;&#138;&#171;e           > 10 FE 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000165AB8C5550, 16 bytes long.
 Data: <&#232;&#253;&#138;&#171;e           > E8 FD 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000165AB8C5960, 16 bytes long.
 Data: <&#192;&#253;&#138;&#171;e           > C0 FD 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000165AB8C6090, 16 bytes long.
 Data: < &#253;&#138;&#171;e           > 98 FD 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000165AB8C5A50, 16 bytes long.
 Data: <p&#253;&#138;&#171;e           > 70 FD 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000165AB8C6180, 16 bytes long.
 Data: <H&#253;&#138;&#171;e           > 48 FD 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000165AB8C0600, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x00000165AB8C5DC0, 16 bytes long.
 Data: < &#253;&#138;&#171;e           > 20 FD 8A AB 65 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000165AB8AFD20, 320 bytes long.
 Data: <&#192;]&#140;&#171;e     &#140;&#171;e   > C0 5D 8C AB 65 01 00 00 00 06 8C AB 65 01 00 00 
{281} normal block at 0x00000165AB8C62C0, 16 bytes long.
 Data: <pe&#140;&#171;e           > 70 65 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000165AB8C5780, 16 bytes long.
 Data: <He&#140;&#171;e           > 48 65 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000165AB8C07E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x00000165AB8C5D70, 16 bytes long.
 Data: < e&#140;&#171;e           > 20 65 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000165AB8BFF40, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x00000165AB8C5CD0, 16 bytes long.
 Data: <hd&#140;&#171;e           > 68 64 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000165AB8C5FF0, 16 bytes long.
 Data: <@d&#140;&#171;e           > 40 64 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000165AB8C5B90, 16 bytes long.
 Data: < d&#140;&#171;e           > 18 64 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000165AB8C5A00, 16 bytes long.
 Data: <&#240;c&#140;&#171;e           > F0 63 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000165AB8C5690, 16 bytes long.
 Data: <&#200;c&#140;&#171;e           > C8 63 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000165AB8C5AF0, 16 bytes long.
 Data: <&#160;c&#140;&#171;e           > A0 63 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000165AB8C5730, 16 bytes long.
 Data: <&#192;&#228;&#139;&#171;e           > C0 E4 8B AB 65 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000165AB8BE4C0, 40 bytes long.
 Data: <0W&#140;&#171;e   p][&#173;e   > 30 57 8C AB 65 01 00 00 70 5D 5B AD 65 01 00 00 
{267} normal block at 0x00000165AB8C5E60, 16 bytes long.
 Data: < c&#140;&#171;e           > 80 63 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000165AB8C5D20, 16 bytes long.
 Data: <Xc&#140;&#171;e           > 58 63 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000165AB8C05A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x00000165AB8C6040, 16 bytes long.
 Data: <0c&#140;&#171;e           > 30 63 8C AB 65 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000165AB8C6330, 992 bytes long.
 Data: <@`&#140;&#171;e   &#160; &#140;&#171;e   > 40 60 8C AB 65 01 00 00 A0 05 8C AB 65 01 00 00 
{99} normal block at 0x00000165AB8BFCA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x00000165AB8C13E0, 16 bytes long.
 Data: < &#226;&#139;&#171;e           > 20 E2 8B AB 65 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x00000165AB8BE220, 40 bytes long.
 Data: <&#224; &#140;&#171;e   &#160;&#252;&#139;&#171;e   > E0 13 8C AB 65 01 00 00 A0 FC 8B AB 65 01 00 00 
{76} normal block at 0x00000165AB8C0F30, 16 bytes long.
 Data: < &#234;<x&#247;           > 80 EA 3C 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x00000165AB8C1480, 16 bytes long.
 Data: <@&#233;<x&#247;           > 40 E9 3C 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x00000165AB8C0940, 16 bytes long.
 Data: <&#248;W9x&#247;           > F8 57 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x00000165AB8C0CB0, 16 bytes long.
 Data: <&#216;W9x&#247;           > D8 57 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x00000165AB8C1340, 16 bytes long.
 Data: <P 9x&#247;           > 50 04 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000165AB8C09E0, 16 bytes long.
 Data: <0 9x&#247;           > 30 04 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000165AB8C0EE0, 16 bytes long.
 Data: <&#224; 9x&#247;           > E0 02 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000165AB8C1070, 16 bytes long.
 Data: <  9x&#247;           > 10 04 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000165AB8C1570, 16 bytes long.
 Data: <p 9x&#247;           > 70 04 39 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000165AB8C0E40, 16 bytes long.
 Data: < &#192;7x&#247;           > 18 C0 37 78 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra