Task 38678749

Name test_459-GPUGRID_TEST_ATM_40STEP_20261023-12-40-RND4761_0
Workunit 31620555
Created 26 Oct 2026, 18:24:21 UTC
Sent 26 Oct 2026, 18:24:25 UTC
Report deadline 31 Oct 2026, 18:24:25 UTC
Received 26 Oct 2026, 20:51:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 609955
Run time 36 min 38 sec
CPU time 29 min 29 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 22,590.50 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 754.86 MB
Peak swap size 9.94 GB
Peak disk usage 3.72 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
05:19:23 (43108): wrapper (7.9.26016): starting
05:19:23 (43108): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
05:19:26 (43108): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:19:26 (43108): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\BOINC\slots\18\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINC\slots\18\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:49:31 (43108): C:/Windows/system32/cmd.exe exited; CPU time 1769.859375
05:49:31 (43108): called boinc_finish(0)
0 bytes in 0 Free Blocks.
456 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 34815501 bytes.
Dumping objects ->
{3835578} normal block at 0x000001AA086B5440, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835567} normal block at 0x000001AA0A7171C0, 32 bytes long.
 Data: <HOME=D:\BOINC\sl> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835556} normal block at 0x000001AA0A717340, 32 bytes long.
 Data: <TMP=D:\BOINC\slo> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835545} normal block at 0x000001AA0A717160, 32 bytes long.
 Data: <TEMP=D:\BOINC\sl> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835534} normal block at 0x000001AA0A717760, 32 bytes long.
 Data: <TMPDIR=D:\BOINC\> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 5C 
{3835503} normal block at 0x000001AA086B53D0, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835492} normal block at 0x000001AA0871AA20, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835489} normal block at 0x000001AA086AF460, 8 bytes long.
 Data: <  f &#170;   > 00 00 66 08 AA 01 00 00 
{3834767} normal block at 0x000001AA0871A950, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3834069} normal block at 0x000001AA086AF050, 8 bytes long.
 Data: <p x &#170;   > 70 E9 78 08 AA 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001AA086A68B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001AA086A7C90, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001AA086B6810, 16 bytes long.
 Data: <&#200;sk &#170;           > C8 73 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001AA086B6180, 16 bytes long.
 Data: < sk &#170;           > A0 73 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001AA086B1450, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001AA086B6270, 16 bytes long.
 Data: <xsk &#170;           > 78 73 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001AA086B64A0, 16 bytes long.
 Data: <Psk &#170;           > 50 73 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001AA086B6F40, 16 bytes long.
 Data: <(sk &#170;           > 28 73 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001AA086B64F0, 16 bytes long.
 Data: < sk &#170;           > 00 73 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001AA086B50C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001AA086B61D0, 16 bytes long.
 Data: <&#216;&#190;i &#170;           > D8 BE 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001AA086B0D90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001AA086B6C20, 16 bytes long.
 Data: <&#176;&#190;i &#170;           > B0 BE 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001AA086B6770, 16 bytes long.
 Data: < &#190;i &#170;           > 88 BE 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001AA086B6720, 16 bytes long.
 Data: <`&#190;i &#170;           > 60 BE 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001AA086B63B0, 16 bytes long.
 Data: <8&#190;i &#170;           > 38 BE 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001AA086B66D0, 16 bytes long.
 Data: < &#190;i &#170;           > 10 BE 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001AA086B6630, 16 bytes long.
 Data: < &#189;i &#170;           > E8 BD 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001AA086B0E50, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001AA086B65E0, 16 bytes long.
 Data: <&#192;&#189;i &#170;           > C0 BD 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001AA0869BDC0, 320 bytes long.
 Data: < ek &#170;   P k &#170;   > E0 65 6B 08 AA 01 00 00 50 0E 6B 08 AA 01 00 00 
{279} normal block at 0x000001AA086B6860, 16 bytes long.
 Data: < rk &#170;           > E0 72 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001AA086B6A40, 16 bytes long.
 Data: <&#184;rk &#170;           > B8 72 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001AA086B1870, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001AA086B6EA0, 16 bytes long.
 Data: < rk &#170;           > 90 72 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001AA086B13F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001AA086B6360, 16 bytes long.
 Data: <&#216;qk &#170;           > D8 71 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001AA086B6F90, 16 bytes long.
 Data: <&#176;qk &#170;           > B0 71 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001AA086B6FE0, 16 bytes long.
 Data: < qk &#170;           > 88 71 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001AA086B6B80, 16 bytes long.
 Data: <`qk &#170;           > 60 71 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001AA086B6D60, 16 bytes long.
 Data: <8qk &#170;           > 38 71 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001AA086B6130, 16 bytes long.
 Data: < qk &#170;           > 10 71 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001AA086B6950, 16 bytes long.
 Data: < Rk &#170;           > 80 52 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001AA086B5280, 40 bytes long.
 Data: <Pik &#170;   &#208;Sk &#170;   > 50 69 6B 08 AA 01 00 00 D0 53 6B 08 AA 01 00 00 
{265} normal block at 0x000001AA086B6B30, 16 bytes long.
 Data: < pk &#170;           > F0 70 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001AA086B6CC0, 16 bytes long.
 Data: <&#200;pk &#170;           > C8 70 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001AA086B1210, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001AA086B6680, 16 bytes long.
 Data: < pk &#170;           > A0 70 6B 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001AA086B70A0, 992 bytes long.
 Data: < fk &#170;     k &#170;   > 80 66 6B 08 AA 01 00 00 10 12 6B 08 AA 01 00 00 
{97} normal block at 0x000001AA086B0DF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001AA086AEC90, 16 bytes long.
 Data: <P i &#170;           > 50 F3 69 08 AA 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001AA0869F350, 40 bytes long.
 Data: <  j &#170;     k &#170;   > 90 EC 6A 08 AA 01 00 00 F0 0D 6B 08 AA 01 00 00 
{72} normal block at 0x000001AA086AEFB0, 16 bytes long.
 Data: <   &#215;            > 80 EA 94 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001AA086AEDD0, 16 bytes long.
 Data: <@  &#215;            > 40 E9 94 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001AA086AEF60, 16 bytes long.
 Data: < W &#215;            > F8 57 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001AA086AEA60, 16 bytes long.
 Data: <&#216;W &#215;            > D8 57 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001AA086AEBF0, 16 bytes long.
 Data: <P  &#215;            > 50 04 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001AA086AF0A0, 16 bytes long.
 Data: <0  &#215;            > 30 04 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001AA086AEE70, 16 bytes long.
 Data: <   &#215;            > E0 02 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001AA086AEB50, 16 bytes long.
 Data: <   &#215;            > 10 04 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001AA086AF140, 16 bytes long.
 Data: <p  &#215;            > 70 04 91 D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001AA086AEF10, 16 bytes long.
 Data: < &#192; &#215;            > 18 C0 8F D7 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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