Task 38678520

Name test_922-GPUGRID_TEST_ATM_40STEP_20261023-31-40-RND9923_0
Workunit 31620335
Created 26 Oct 2026, 17:40:43 UTC
Sent 26 Oct 2026, 17:40:49 UTC
Report deadline 31 Oct 2026, 17:40:49 UTC
Received 26 Oct 2026, 19:31:35 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 653612
Run time 1 hours 28 min 55 sec
CPU time 1 hours 21 min 13 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 2,141.69 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 642.41 MB
Peak swap size 2.96 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
02:02:38 (8012): wrapper (7.9.26016): starting
02:02:38 (8012): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:02:49 (8012): Library/usr/bin/tar.exe exited; CPU time 0.109375
02:02:49 (8012): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
03:31:06 (8012): C:/Windows/system32/cmd.exe exited; CPU time 4873.093750
03:31:06 (8012): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 68984555 bytes.
Dumping objects ->
{3835525} normal block at 0x000001CCA6EE3DB0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835514} normal block at 0x000001CCA4D94E10, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835503} normal block at 0x000001CCA4D94D30, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835492} normal block at 0x000001CCA4D94A90, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x000001CCA4D94A20, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835450} normal block at 0x000001CCA6E58550, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835437} normal block at 0x000001CCA4D90C20, 8 bytes long.
 Data: <  )     > 00 00 29 A5 CC 01 00 00 
{3834053} normal block at 0x000001CCA4D90E00, 8 bytes long.
 Data: < K      > C0 4B EB A6 CC 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001CCA4D8EF70, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001CCA4D860F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001CCA4D95E90, 16 bytes long.
 Data: < T              > 88 54 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001CCA4D960C0, 16 bytes long.
 Data: <`T              > 60 54 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001CCA4D8F800, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001CCA4D95C60, 16 bytes long.
 Data: <8T              > 38 54 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001CCA4D957B0, 16 bytes long.
 Data: < T              > 10 54 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001CCA4D95DA0, 16 bytes long.
 Data: < S              > E8 53 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001CCA4D95760, 16 bytes long.
 Data: < S              > C0 53 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001CCA4D94BE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001CCA4D964D0, 16 bytes long.
 Data: <x               > 78 8B D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001CCA4D8F7A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001CCA4D95E40, 16 bytes long.
 Data: <P               > 50 8B D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001CCA4D95C10, 16 bytes long.
 Data: <(               > 28 8B D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001CCA4D96110, 16 bytes long.
 Data: <                > 00 8B D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001CCA4D958A0, 16 bytes long.
 Data: <                > D8 8A D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001CCA4D95D50, 16 bytes long.
 Data: <                > B0 8A D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001CCA4D958F0, 16 bytes long.
 Data: <                > 88 8A D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001CCA4D8FAA0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001CCA4D95BC0, 16 bytes long.
 Data: <`               > 60 8A D8 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001CCA4D88A60, 320 bytes long.
 Data: < [              > C0 5B D9 A4 CC 01 00 00 A0 FA D8 A4 CC 01 00 00 
{275} normal block at 0x000001CCA4D96480, 16 bytes long.
 Data: < S              > A0 53 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001CCA4D96250, 16 bytes long.
 Data: <xS              > 78 53 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001CCA4D8F920, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001CCA4D96160, 16 bytes long.
 Data: <PS              > 50 53 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001CCA4D8F440, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001CCA4D95710, 16 bytes long.
 Data: < R              > 98 52 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001CCA4D963E0, 16 bytes long.
 Data: <pR              > 70 52 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001CCA4D95800, 16 bytes long.
 Data: <HR              > 48 52 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001CCA4D95DF0, 16 bytes long.
 Data: < R              > 20 52 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001CCA4D90D60, 16 bytes long.
 Data: < Q              > F8 51 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001CCA4D905E0, 16 bytes long.
 Data: < Q              > D0 51 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001CCA4D911C0, 16 bytes long.
 Data: < N              > F0 4E D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001CCA4D94EF0, 40 bytes long.
 Data: <        P       > C0 11 D9 A4 CC 01 00 00 50 85 E5 A6 CC 01 00 00 
{261} normal block at 0x000001CCA4D90630, 16 bytes long.
 Data: < Q              > B0 51 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001CCA4D90CC0, 16 bytes long.
 Data: < Q              > 88 51 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001CCA4D902E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001CCA4D90C70, 16 bytes long.
 Data: <`Q              > 60 51 D9 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001CCA4D95160, 992 bytes long.
 Data: <p               > 70 0C D9 A4 CC 01 00 00 E0 02 D9 A4 CC 01 00 00 
{93} normal block at 0x000001CCA4D8FA40, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001CCA4D91030, 16 bytes long.
 Data: <@               > 40 B4 D7 A4 CC 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001CCA4D7B440, 40 bytes long.
 Data: <0       @       > 30 10 D9 A4 CC 01 00 00 40 FA D8 A4 CC 01 00 00 
{68} normal block at 0x000001CCA4D90F90, 16 bytes long.
 Data: <  a>            > 80 EA 61 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001CCA4D910D0, 16 bytes long.
 Data: <@ a>            > 40 E9 61 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001CCA4D90680, 16 bytes long.
 Data: < W^>            > F8 57 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001CCA4D91260, 16 bytes long.
 Data: < W^>            > D8 57 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001CCA4D913A0, 16 bytes long.
 Data: <P ^>            > 50 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001CCA4D906D0, 16 bytes long.
 Data: <0 ^>            > 30 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001CCA4D90590, 16 bytes long.
 Data: <  ^>            > E0 02 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001CCA4D90DB0, 16 bytes long.
 Data: <  ^>            > 10 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001CCA4D91170, 16 bytes long.
 Data: <p ^>            > 70 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001CCA4D91120, 16 bytes long.
 Data: <  \>            > 18 C0 5C 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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