Task 38678328

Name test_1186-GPUGRID_TEST_ATM_2STEP_20261024-0-2-RND0702_1
Workunit 31602609
Created 26 Oct 2026, 17:03:52 UTC
Sent 26 Oct 2026, 17:03:57 UTC
Report deadline 31 Oct 2026, 17:03:57 UTC
Received 26 Oct 2026, 20:26:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 607118
Run time 48 min 48 sec
CPU time 42 min 1 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 5,441.05 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 634.93 MB
Peak swap size 9.73 GB
Peak disk usage 3.86 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:25:29 (10832): wrapper (7.9.26016): starting
21:25:29 (10832): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:25:31 (10832): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:25:33 (10832): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:11:30 (10832): C:/Windows/system32/cmd.exe exited; CPU time 2521.312500
22:11:30 (10832): called boinc_finish(0)
0 bytes in 0 Free Blocks.
616 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 29035001 bytes.
Dumping objects ->
{3835241} normal block at 0x000002185D65AD70, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835230} normal block at 0x000002185D65A8A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835219} normal block at 0x000002185D65AC20, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835208} normal block at 0x000002185D65A590, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835197} normal block at 0x000002185B92B4C0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835166} normal block at 0x000002185D5FCBC0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835155} normal block at 0x000002185D716680, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835151} normal block at 0x000002185B926AF0, 8 bytes long.
 Data: <   [    > 00 00 88 5B 18 02 00 00 
{3834544} normal block at 0x000002185D7164A0, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833941} normal block at 0x000002185B9268C0, 8 bytes long.
 Data: <@&#235;U]    > 40 EB 55 5D 18 02 00 00 
..\zip\boinc_zip.cpp(122) : {302} normal block at 0x000002185B931990, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002185B91B9F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{286} normal block at 0x000002185B932980, 16 bytes long.
 Data: <HP&#147;[            > 48 50 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002185B932E30, 16 bytes long.
 Data: < P&#147;[            > 20 50 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002185B92CF50, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{283} normal block at 0x000002185B932CF0, 16 bytes long.
 Data: <&#248;O&#147;[            > F8 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002185B932890, 16 bytes long.
 Data: <&#208;O&#147;[            > D0 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002185B932BB0, 16 bytes long.
 Data: <&#168;O&#147;[            > A8 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002185B9336F0, 16 bytes long.
 Data: <&#128;O&#147;[            > 80 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002185B92AEA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{278} normal block at 0x000002185B932B60, 16 bytes long.
 Data: <&#200;Z&#145;[            > C8 5A 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002185B92C410, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{276} normal block at 0x000002185B933290, 16 bytes long.
 Data: <&#160;Z&#145;[            > A0 5A 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002185B933060, 16 bytes long.
 Data: <xZ&#145;[            > 78 5A 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002185B933600, 16 bytes long.
 Data: <PZ&#145;[            > 50 5A 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002185B932CA0, 16 bytes long.
 Data: <(Z&#145;[            > 28 5A 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002185B933330, 16 bytes long.
 Data: < Z&#145;[            > 00 5A 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002185B9334C0, 16 bytes long.
 Data: <&#216;Y&#145;[            > D8 59 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002185B92C4D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{268} normal block at 0x000002185B933240, 16 bytes long.
 Data: <&#176;Y&#145;[            > B0 59 91 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002185B9159B0, 320 bytes long.
 Data: <@2&#147;[    &#208;&#196;&#146;[    > 40 32 93 5B 18 02 00 00 D0 C4 92 5B 18 02 00 00 
{266} normal block at 0x000002185B9332E0, 16 bytes long.
 Data: <`O&#147;[            > 60 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002185B932DE0, 16 bytes long.
 Data: <8O&#147;[            > 38 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002185B92CB30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{263} normal block at 0x000002185B9331A0, 16 bytes long.
 Data: < O&#147;[            > 10 4F 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002185B92C8F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{261} normal block at 0x000002185B9333D0, 16 bytes long.
 Data: <XN&#147;[            > 58 4E 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002185B933650, 16 bytes long.
 Data: <0N&#147;[            > 30 4E 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002185B932AC0, 16 bytes long.
 Data: < N&#147;[            > 08 4E 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002185B933150, 16 bytes long.
 Data: <&#224;M&#147;[            > E0 4D 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002185B933010, 16 bytes long.
 Data: <&#184;M&#147;[            > B8 4D 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002185B932B10, 16 bytes long.
 Data: <&#144;M&#147;[            > 90 4D 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000002185B932D90, 16 bytes long.
 Data: < &#178;&#146;[            > 20 B2 92 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002185B92B220, 40 bytes long.
 Data: <&#144;-&#147;[    &#192;&#203;_]    > 90 2D 93 5B 18 02 00 00 C0 CB 5F 5D 18 02 00 00 
{252} normal block at 0x000002185B9331F0, 16 bytes long.
 Data: <pM&#147;[            > 70 4D 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000002185B932E80, 16 bytes long.
 Data: <HM&#147;[            > 48 4D 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002185B92C530, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{249} normal block at 0x000002185B9328E0, 16 bytes long.
 Data: < M&#147;[            > 20 4D 93 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{248} normal block at 0x000002185B934D20, 992 bytes long.
 Data: <&#224;(&#147;[    0&#197;&#146;[    > E0 28 93 5B 18 02 00 00 30 C5 92 5B 18 02 00 00 
{84} normal block at 0x000002185B92CAD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{83} normal block at 0x000002185B926E60, 16 bytes long.
 Data: <&#240;&#175;&#146;[            > F0 AF 92 5B 18 02 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x000002185B92AFF0, 40 bytes long.
 Data: <`n&#146;[    &#208;&#202;&#146;[    > 60 6E 92 5B 18 02 00 00 D0 CA 92 5B 18 02 00 00 
{61} normal block at 0x000002185B9261E0, 16 bytes long.
 Data: <&#128;&#234;  &#246;           > 80 EA 16 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002185B926690, 16 bytes long.
 Data: <@&#233;  &#246;           > 40 E9 16 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002185B926870, 16 bytes long.
 Data: <&#248;W  &#246;           > F8 57 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002185B926DC0, 16 bytes long.
 Data: <&#216;W  &#246;           > D8 57 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002185B926C80, 16 bytes long.
 Data: <P   &#246;           > 50 04 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002185B926F00, 16 bytes long.
 Data: <0   &#246;           > 30 04 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002185B926730, 16 bytes long.
 Data: <&#224;   &#246;           > E0 02 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002185B926640, 16 bytes long.
 Data: <    &#246;           > 10 04 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000002185B926EB0, 16 bytes long.
 Data: <p   &#246;           > 70 04 13 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000002185B926C30, 16 bytes long.
 Data: < &#192;  &#246;           > 18 C0 11 20 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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