Task 38677951

Name test_82-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND1747_0
Workunit 31619800
Created 26 Oct 2026, 15:56:27 UTC
Sent 26 Oct 2026, 15:56:31 UTC
Report deadline 31 Oct 2026, 15:56:31 UTC
Received 26 Oct 2026, 16:14:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654879
Run time 17 min 30 sec
CPU time 16 min 37 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 84,053.55 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 745.13 MB
Peak swap size 13.15 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
16:57:40 (31660): wrapper (7.9.26016): starting
16:57:40 (31660): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:57:41 (31660): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:57:41 (31660): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:14:30 (31660): C:/Windows/system32/cmd.exe exited; CPU time 997.015625
17:14:30 (31660): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 16605465 bytes.
Dumping objects ->
{3835018} normal block at 0x000001ADEE7361E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835007} normal block at 0x000001ADEE735D80, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3834996} normal block at 0x000001ADEE7365D0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3834985} normal block at 0x000001ADEE735990, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3834974} normal block at 0x000001ADEC926C40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3834943} normal block at 0x000001ADEE6D8ED0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3834930} normal block at 0x000001ADEC91D890, 8 bytes long.
 Data: <  &#207;&#236;&#173;   > 00 00 CF EC AD 01 00 00 
{3833961} normal block at 0x000001ADEC91E1A0, 8 bytes long.
 Data: < &#234;&#159;&#236;&#173;   > 80 EA 9F EC AD 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001ADEC9215B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001ADEC916270, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001ADEC927CB0, 16 bytes long.
 Data: <&#232;&#133;&#146;&#236;&#173;           > E8 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001ADEC927AD0, 16 bytes long.
 Data: <&#192;&#133;&#146;&#236;&#173;           > C0 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001ADEC91F940, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001ADEC927C10, 16 bytes long.
 Data: < &#133;&#146;&#236;&#173;           > 98 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001ADEC928070, 16 bytes long.
 Data: <p&#133;&#146;&#236;&#173;           > 70 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001ADEC9275D0, 16 bytes long.
 Data: <H&#133;&#146;&#236;&#173;           > 48 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001ADEC9273A0, 16 bytes long.
 Data: < &#133;&#146;&#236;&#173;           > 20 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001ADEC926EE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001ADEC9280C0, 16 bytes long.
 Data: <&#168;&#231; &#236;&#173;           > A8 E7 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001ADEC91EE60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001ADEC927300, 16 bytes long.
 Data: < &#231; &#236;&#173;           > 80 E7 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001ADEC927D00, 16 bytes long.
 Data: <X&#231; &#236;&#173;           > 58 E7 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001ADEC928110, 16 bytes long.
 Data: <0&#231; &#236;&#173;           > 30 E7 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001ADEC927530, 16 bytes long.
 Data: < &#231; &#236;&#173;           > 08 E7 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001ADEC927580, 16 bytes long.
 Data: <&#224;&#230; &#236;&#173;           > E0 E6 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001ADEC927DF0, 16 bytes long.
 Data: <&#184;&#230; &#236;&#173;           > B8 E6 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001ADEC91F5E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001ADEC927E40, 16 bytes long.
 Data: < &#230; &#236;&#173;           > 90 E6 90 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001ADEC90E690, 320 bytes long.
 Data: <@~&#146;&#236;&#173;   &#224;&#245;&#145;&#236;&#173;   > 40 7E 92 EC AD 01 00 00 E0 F5 91 EC AD 01 00 00 
{276} normal block at 0x000001ADEC927DA0, 16 bytes long.
 Data: < &#133;&#146;&#236;&#173;           > 00 85 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001ADEC927B70, 16 bytes long.
 Data: <&#216;&#132;&#146;&#236;&#173;           > D8 84 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001ADEC91F1C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001ADEC928020, 16 bytes long.
 Data: <&#176;&#132;&#146;&#236;&#173;           > B0 84 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001ADEC91F340, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001ADEC927FD0, 16 bytes long.
 Data: <&#248; &#146;&#236;&#173;           > F8 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001ADEC927670, 16 bytes long.
 Data: <&#208; &#146;&#236;&#173;           > D0 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001ADEC928250, 16 bytes long.
 Data: <&#168; &#146;&#236;&#173;           > A8 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001ADEC927F80, 16 bytes long.
 Data: <  &#146;&#236;&#173;           > 80 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001ADEC927F30, 16 bytes long.
 Data: <X &#146;&#236;&#173;           > 58 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001ADEC9278F0, 16 bytes long.
 Data: <0 &#146;&#236;&#173;           > 30 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001ADEC927940, 16 bytes long.
 Data: < m&#146;&#236;&#173;           > 20 6D 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001ADEC926D20, 40 bytes long.
 Data: <@y&#146;&#236;&#173;   &#208;&#142;m&#238;&#173;   > 40 79 92 EC AD 01 00 00 D0 8E 6D EE AD 01 00 00 
{262} normal block at 0x000001ADEC9279E0, 16 bytes long.
 Data: <  &#146;&#236;&#173;           > 10 83 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001ADEC927B20, 16 bytes long.
 Data: <&#232;&#130;&#146;&#236;&#173;           > E8 82 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001ADEC91F7C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001ADEC927EE0, 16 bytes long.
 Data: <&#192;&#130;&#146;&#236;&#173;           > C0 82 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001ADEC9282C0, 992 bytes long.
 Data: <&#224;~&#146;&#236;&#173;   &#192;&#247;&#145;&#236;&#173;   > E0 7E 92 EC AD 01 00 00 C0 F7 91 EC AD 01 00 00 
{94} normal block at 0x000001ADEC91F880, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001ADEC91D840, 16 bytes long.
 Data: <&#240;q&#146;&#236;&#173;           > F0 71 92 EC AD 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001ADEC9271F0, 40 bytes long.
 Data: <@&#216;&#145;&#236;&#173;    &#248;&#145;&#236;&#173;   > 40 D8 91 EC AD 01 00 00 80 F8 91 EC AD 01 00 00 
{71} normal block at 0x000001ADEC91DDE0, 16 bytes long.
 Data: < &#234;&#159;7&#247;           > 80 EA 9F 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001ADEC91D750, 16 bytes long.
 Data: <@&#233;&#159;7&#247;           > 40 E9 9F 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001ADEC91DF20, 16 bytes long.
 Data: <&#248;W&#156;7&#247;           > F8 57 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001ADEC91E010, 16 bytes long.
 Data: <&#216;W&#156;7&#247;           > D8 57 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001ADEC91DD90, 16 bytes long.
 Data: <P &#156;7&#247;           > 50 04 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001ADEC91D610, 16 bytes long.
 Data: <0 &#156;7&#247;           > 30 04 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001ADEC91E100, 16 bytes long.
 Data: <&#224; &#156;7&#247;           > E0 02 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001ADEC91DCF0, 16 bytes long.
 Data: <  &#156;7&#247;           > 10 04 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001ADEC91DB60, 16 bytes long.
 Data: <p &#156;7&#247;           > 70 04 9C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001ADEC91DD40, 16 bytes long.
 Data: < &#192;&#154;7&#247;           > 18 C0 9A 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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