Task 38677926

Name test_868-GPUGRID_TEST_ATM_40STEP_20261023-17-40-RND6118_0
Workunit 31619776
Created 26 Oct 2026, 15:50:37 UTC
Sent 26 Oct 2026, 15:50:43 UTC
Report deadline 31 Oct 2026, 15:50:43 UTC
Received 26 Oct 2026, 16:20:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 638078
Run time 20 min 6 sec
CPU time 17 min 17 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 51,075.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 804.82 MB
Peak swap size 10.08 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
17:01:13 (42684): wrapper (7.9.26016): starting
17:01:13 (42684): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:01:14 (42684): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:01:14 (42684): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:20:36 (42684): C:/Windows/system32/cmd.exe exited; CPU time 1037.734375
17:20:36 (42684): called boinc_finish(0)
0 bytes in 0 Free Blocks.
426 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 26859432 bytes.
Dumping objects ->
{3835471} normal block at 0x0000028D99504350, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835460} normal block at 0x0000028D99504820, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835449} normal block at 0x0000028D97744BA0, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835438} normal block at 0x0000028D97744B30, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835427} normal block at 0x0000028D97744DD0, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835396} normal block at 0x0000028D9947B900, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835385} normal block at 0x0000028D9948CDA0, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835382} normal block at 0x0000028D9773D990, 8 bytes long.
 Data: <  n&#151;    > 00 00 6E 97 8D 02 00 00 
{3834663} normal block at 0x0000028D9948DFC0, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000028D9773D8F0, 8 bytes long.
 Data: <PLM     > 50 4C 4D 99 8D 02 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000028D97741930, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000028D97735FB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000028D97745E60, 16 bytes long.
 Data: < jt&#151;            > 18 6A 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000028D97746270, 16 bytes long.
 Data: <&#240;it&#151;            > F0 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000028D9773F160, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000028D97746630, 16 bytes long.
 Data: <&#200;it&#151;            > C8 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000028D97745A50, 16 bytes long.
 Data: <&#160;it&#151;            > A0 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000028D97746680, 16 bytes long.
 Data: <xit&#151;            > 78 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000028D97745870, 16 bytes long.
 Data: <Pit&#151;            > 50 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000028D97744F90, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000028D97746400, 16 bytes long.
 Data: <&#216;&#138;s&#151;            > D8 8A 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000028D9773FBE0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000028D97745E10, 16 bytes long.
 Data: <&#176;&#138;s&#151;            > B0 8A 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000028D977464A0, 16 bytes long.
 Data: < &#138;s&#151;            > 88 8A 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000028D97745C80, 16 bytes long.
 Data: <`&#138;s&#151;            > 60 8A 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000028D97745820, 16 bytes long.
 Data: <8&#138;s&#151;            > 38 8A 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000028D97745EB0, 16 bytes long.
 Data: < &#138;s&#151;            > 10 8A 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000028D97746360, 16 bytes long.
 Data: <&#232;&#137;s&#151;            > E8 89 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000028D9773F940, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000028D977462C0, 16 bytes long.
 Data: <&#192;&#137;s&#151;            > C0 89 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000028D977389C0, 320 bytes long.
 Data: <&#192;bt&#151;    @&#249;s&#151;    > C0 62 74 97 8D 02 00 00 40 F9 73 97 8D 02 00 00 
{280} normal block at 0x0000028D97745780, 16 bytes long.
 Data: <0it&#151;            > 30 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000028D977457D0, 16 bytes long.
 Data: < it&#151;            > 08 69 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000028D9773F460, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000028D977465E0, 16 bytes long.
 Data: <&#224;ht&#151;            > E0 68 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000028D9773EE00, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000028D97745B40, 16 bytes long.
 Data: <(ht&#151;            > 28 68 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000028D97745C30, 16 bytes long.
 Data: < ht&#151;            > 00 68 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000028D97746540, 16 bytes long.
 Data: <&#216;gt&#151;            > D8 67 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000028D97745BE0, 16 bytes long.
 Data: <&#176;gt&#151;            > B0 67 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000028D97745F50, 16 bytes long.
 Data: < gt&#151;            > 88 67 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000028D97745DC0, 16 bytes long.
 Data: <`gt&#151;            > 60 67 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000028D97745D70, 16 bytes long.
 Data: <&#176;Nt&#151;            > B0 4E 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000028D97744EB0, 40 bytes long.
 Data: <p]t&#151;     &#185;G     > 70 5D 74 97 8D 02 00 00 00 B9 47 99 8D 02 00 00 
{266} normal block at 0x0000028D97745D20, 16 bytes long.
 Data: <@gt&#151;            > 40 67 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000028D97746090, 16 bytes long.
 Data: < gt&#151;            > 18 67 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000028D9773EDA0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000028D97746040, 16 bytes long.
 Data: <&#240;ft&#151;            > F0 66 74 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000028D977466F0, 992 bytes long.
 Data: <@`t&#151;    &#160;&#237;s&#151;    > 40 60 74 97 8D 02 00 00 A0 ED 73 97 8D 02 00 00 
{98} normal block at 0x0000028D9773EF20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000028D9773D710, 16 bytes long.
 Data: < &#236;s&#151;            > 90 EC 73 97 8D 02 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000028D9773EC90, 40 bytes long.
 Data: < &#215;s&#151;     &#239;s&#151;    > 10 D7 73 97 8D 02 00 00 20 EF 73 97 8D 02 00 00 
{75} normal block at 0x0000028D9773DD00, 16 bytes long.
 Data: < &#234;j &#246;           > 80 EA 6A 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000028D9773DCB0, 16 bytes long.
 Data: <@&#233;j &#246;           > 40 E9 6A 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000028D9773E110, 16 bytes long.
 Data: <&#248;Wg &#246;           > F8 57 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000028D9773D670, 16 bytes long.
 Data: <&#216;Wg &#246;           > D8 57 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000028D9773DDA0, 16 bytes long.
 Data: <P g &#246;           > 50 04 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000028D9773E2F0, 16 bytes long.
 Data: <0 g &#246;           > 30 04 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000028D9773E2A0, 16 bytes long.
 Data: <&#224; g &#246;           > E0 02 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000028D9773DAD0, 16 bytes long.
 Data: <  g &#246;           > 10 04 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000028D9773D850, 16 bytes long.
 Data: <p g &#246;           > 70 04 67 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000028D9773DE40, 16 bytes long.
 Data: < &#192;e &#246;           > 18 C0 65 01 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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