Task 38677709

Name test_675-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND6472_0
Workunit 31619568
Created 26 Oct 2026, 15:10:41 UTC
Sent 26 Oct 2026, 15:10:46 UTC
Report deadline 31 Oct 2026, 15:10:46 UTC
Received 26 Oct 2026, 16:55:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654845
Run time 26 min 3 sec
CPU time 19 min 59 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 32,075.31 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 723.61 MB
Peak swap size 1.68 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
18:29:03 (2896): wrapper (7.9.26016): starting
18:29:03 (2896): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
18:29:05 (2896): Library/usr/bin/tar.exe exited; CPU time 0.000000
18:29:05 (2896): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:53:13 (2896): C:/Windows/system32/cmd.exe exited; CPU time 1199.343750
18:53:13 (2896): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 17804227 bytes.
Dumping objects ->
{3835468} normal block at 0x000001D93FAECE20, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835457} normal block at 0x000001D93FAEC330, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835446} normal block at 0x000001D93FAECFE0, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835435} normal block at 0x000001D93E0CAD20, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835424} normal block at 0x000001D93E0CACB0, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835393} normal block at 0x000001D93FB34310, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835382} normal block at 0x000001D93E19CFA0, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835379} normal block at 0x000001D93E0C6990, 8 bytes long.
 Data: <   >&#217;   > 00 00 00 3E D9 01 00 00 
{3834658} normal block at 0x000001D93E19D780, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833947} normal block at 0x000001D93E0C6030, 8 bytes long.
 Data: <  &#185;?&#217;   > 10 07 B9 3F D9 01 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x000001D93E0CF9E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001D93E0B5B30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x000001D93E0D14C0, 16 bytes long.
 Data: <&#232;. >&#217;           > E8 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001D93E0D08E0, 16 bytes long.
 Data: <&#192;. >&#217;           > C0 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001D93E0CC8B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x000001D93E0D0E80, 16 bytes long.
 Data: < . >&#217;           > 98 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001D93E0D1470, 16 bytes long.
 Data: <p. >&#217;           > 70 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001D93E0D1420, 16 bytes long.
 Data: <H. >&#217;           > 48 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001D93E0D1380, 16 bytes long.
 Data: < . >&#217;           > 20 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001D93E0CAB60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x000001D93E0D0C50, 16 bytes long.
 Data: <&#200;Z >&#217;           > C8 5A 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001D93E0CC730, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x000001D93E0D09D0, 16 bytes long.
 Data: <&#160;Z >&#217;           > A0 5A 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001D93E0D07F0, 16 bytes long.
 Data: <xZ >&#217;           > 78 5A 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001D93E0D0DE0, 16 bytes long.
 Data: <PZ >&#217;           > 50 5A 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001D93E0D0890, 16 bytes long.
 Data: <(Z >&#217;           > 28 5A 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001D93E0D0C00, 16 bytes long.
 Data: < Z >&#217;           > 00 5A 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001D93E0D1510, 16 bytes long.
 Data: <&#216;Y >&#217;           > D8 59 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001D93E0CBEF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x000001D93E0D0BB0, 16 bytes long.
 Data: <&#176;Y >&#217;           > B0 59 0B 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001D93E0B59B0, 320 bytes long.
 Data: <&#176;  >&#217;   &#240;&#190; >&#217;   > B0 0B 0D 3E D9 01 00 00 F0 BE 0C 3E D9 01 00 00 
{269} normal block at 0x000001D93E0D0A70, 16 bytes long.
 Data: < . >&#217;           > 00 2E 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001D93E0D1330, 16 bytes long.
 Data: <&#216;- >&#217;           > D8 2D 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001D93E0CBE30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x000001D93E0D11A0, 16 bytes long.
 Data: <&#176;- >&#217;           > B0 2D 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001D93E0CC790, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x000001D93E0D0E30, 16 bytes long.
 Data: <&#248;, >&#217;           > F8 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001D93E0D1740, 16 bytes long.
 Data: <&#208;, >&#217;           > D0 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001D93E0D13D0, 16 bytes long.
 Data: <&#168;, >&#217;           > A8 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001D93E0D0CF0, 16 bytes long.
 Data: < , >&#217;           > 80 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001D93E0D16A0, 16 bytes long.
 Data: <X, >&#217;           > 58 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001D93E0D11F0, 16 bytes long.
 Data: <0, >&#217;           > 30 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001D93E0D1650, 16 bytes long.
 Data: <&#224;&#174; >&#217;           > E0 AE 0C 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001D93E0CAEE0, 40 bytes long.
 Data: <P  >&#217;    C&#179;?&#217;   > 50 16 0D 3E D9 01 00 00 10 43 B3 3F D9 01 00 00 
{255} normal block at 0x000001D93E0D12E0, 16 bytes long.
 Data: < , >&#217;           > 10 2C 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000001D93E0D0B10, 16 bytes long.
 Data: <&#232;+ >&#217;           > E8 2B 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001D93E0CC550, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x000001D93E0D10B0, 16 bytes long.
 Data: <&#192;+ >&#217;           > C0 2B 0D 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000001D93E0D2BC0, 992 bytes long.
 Data: <&#176;  >&#217;   P&#197; >&#217;   > B0 10 0D 3E D9 01 00 00 50 C5 0C 3E D9 01 00 00 
{87} normal block at 0x000001D93E0CC610, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x000001D93E0C6120, 16 bytes long.
 Data: <&#240;&#177; >&#217;           > F0 B1 0C 3E D9 01 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x000001D93E0CB1F0, 40 bytes long.
 Data: < a >&#217;    &#198; >&#217;   > 20 61 0C 3E D9 01 00 00 10 C6 0C 3E D9 01 00 00 
{64} normal block at 0x000001D93E0C6620, 16 bytes long.
 Data: < &#234;3&#174;&#247;           > 80 EA 33 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001D93E0C6760, 16 bytes long.
 Data: <@&#233;3&#174;&#247;           > 40 E9 33 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001D93E0C5FE0, 16 bytes long.
 Data: <&#248;W0&#174;&#247;           > F8 57 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001D93E0C5D60, 16 bytes long.
 Data: <&#216;W0&#174;&#247;           > D8 57 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001D93E0C6AD0, 16 bytes long.
 Data: <P 0&#174;&#247;           > 50 04 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001D93E0C5DB0, 16 bytes long.
 Data: <0 0&#174;&#247;           > 30 04 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001D93E0C6C60, 16 bytes long.
 Data: <&#224; 0&#174;&#247;           > E0 02 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001D93E0C6940, 16 bytes long.
 Data: <  0&#174;&#247;           > 10 04 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001D93E0C63F0, 16 bytes long.
 Data: <p 0&#174;&#247;           > 70 04 30 AE F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000001D93E0C65D0, 16 bytes long.
 Data: < &#192;.&#174;&#247;           > 18 C0 2E AE F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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