Task 38677322

Name test_319-GPUGRID_TEST_ATM_40STEP_20261023-39-40-RND7609_0
Workunit 31619200
Created 26 Oct 2026, 13:58:31 UTC
Sent 26 Oct 2026, 13:58:36 UTC
Report deadline 31 Oct 2026, 13:58:36 UTC
Received 26 Oct 2026, 15:12:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652544
Run time 44 min 39 sec
CPU time 41 min 54 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 17,076.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 714.85 MB
Peak swap size 12.91 GB
Peak disk usage 3.73 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
15:29:09 (56404): wrapper (7.9.26016): starting
15:29:09 (56404): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
15:29:11 (56404): Library/usr/bin/tar.exe exited; CPU time 0.046875
15:29:11 (56404): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
16:11:35 (56404): C:/Windows/system32/cmd.exe exited; CPU time 2514.906250
16:11:35 (56404): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 65765111 bytes.
Dumping objects ->
{3835258} normal block at 0x0000011CE69B16B0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835247} normal block at 0x0000011CE69B1250, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835236} normal block at 0x0000011CE69B11E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835225} normal block at 0x0000011CE69B0CA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835214} normal block at 0x0000011CE69B0F40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835183} normal block at 0x0000011CE6A5B7A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835172} normal block at 0x0000011CE6B43CC0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835169} normal block at 0x0000011CE4D056C0, 8 bytes long.
 Data: <   &#230;    > 00 00 80 E6 1C 01 00 00 
{3834553} normal block at 0x0000011CE6B43A50, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833947} normal block at 0x0000011CE4D05AD0, 8 bytes long.
 Data: <`&#198;&#213;&#228;    > 60 C6 D5 E4 1C 01 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x0000011CE4D10BC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000011CE4CFB590, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x0000011CE4D125B0, 16 bytes long.
 Data: <&#232;.&#209;&#228;            > E8 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000011CE4D12970, 16 bytes long.
 Data: <&#192;.&#209;&#228;            > C0 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000011CE4D0B7E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x0000011CE4D12060, 16 bytes long.
 Data: < .&#209;&#228;            > 98 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000011CE4D12010, 16 bytes long.
 Data: <p.&#209;&#228;            > 70 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000011CE4D11CA0, 16 bytes long.
 Data: <H.&#209;&#228;            > 48 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000011CE4D12510, 16 bytes long.
 Data: < .&#209;&#228;            > 20 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000011CE4D0A4B0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x0000011CE4D12150, 16 bytes long.
 Data: < &#178;&#207;&#228;            > 88 B2 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000011CE4D0BF60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x0000011CE4D11C00, 16 bytes long.
 Data: <`&#178;&#207;&#228;            > 60 B2 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000011CE4D11E30, 16 bytes long.
 Data: <8&#178;&#207;&#228;            > 38 B2 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000011CE4D124C0, 16 bytes long.
 Data: < &#178;&#207;&#228;            > 10 B2 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000011CE4D12B50, 16 bytes long.
 Data: <&#232;&#177;&#207;&#228;            > E8 B1 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000011CE4D12470, 16 bytes long.
 Data: <&#192;&#177;&#207;&#228;            > C0 B1 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000011CE4D12B00, 16 bytes long.
 Data: < &#177;&#207;&#228;            > 98 B1 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000011CE4D0C200, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x0000011CE4D11F70, 16 bytes long.
 Data: <p&#177;&#207;&#228;            > 70 B1 CF E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000011CE4CFB170, 320 bytes long.
 Data: <p &#209;&#228;     &#194;&#208;&#228;    > 70 1F D1 E4 1C 01 00 00 00 C2 D0 E4 1C 01 00 00 
{269} normal block at 0x0000011CE4D11D90, 16 bytes long.
 Data: < .&#209;&#228;            > 00 2E D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000011CE4D11DE0, 16 bytes long.
 Data: <&#216;-&#209;&#228;            > D8 2D D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000011CE4D0B960, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x0000011CE4D12420, 16 bytes long.
 Data: <&#176;-&#209;&#228;            > B0 2D D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000011CE4D0BA20, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x0000011CE4D11C50, 16 bytes long.
 Data: <&#248;,&#209;&#228;            > F8 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000011CE4D11E80, 16 bytes long.
 Data: <&#208;,&#209;&#228;            > D0 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000011CE4D12380, 16 bytes long.
 Data: <&#168;,&#209;&#228;            > A8 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000011CE4D123D0, 16 bytes long.
 Data: < ,&#209;&#228;            > 80 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000011CE4D12330, 16 bytes long.
 Data: <X,&#209;&#228;            > 58 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000011CE4D12A60, 16 bytes long.
 Data: <0,&#209;&#228;            > 30 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000011CE4D11D40, 16 bytes long.
 Data: <@&#164;&#208;&#228;            > 40 A4 D0 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000011CE4D0A440, 40 bytes long.
 Data: <@ &#209;&#228;    &#160;&#183;&#165;&#230;    > 40 1D D1 E4 1C 01 00 00 A0 B7 A5 E6 1C 01 00 00 
{255} normal block at 0x0000011CE4D11F20, 16 bytes long.
 Data: < ,&#209;&#228;            > 10 2C D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000011CE4D12AB0, 16 bytes long.
 Data: <&#232;+&#209;&#228;            > E8 2B D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000011CE4D0B6C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x0000011CE4D12A10, 16 bytes long.
 Data: <&#192;+&#209;&#228;            > C0 2B D1 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x0000011CE4D12BC0, 992 bytes long.
 Data: < *&#209;&#228;    &#192;&#182;&#208;&#228;    > 10 2A D1 E4 1C 01 00 00 C0 B6 D0 E4 1C 01 00 00 
{87} normal block at 0x0000011CE4D0BA80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x0000011CE4D05B70, 16 bytes long.
 Data: <`&#163;&#208;&#228;            > 60 A3 D0 E4 1C 01 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x0000011CE4D0A360, 40 bytes long.
 Data: <p[&#208;&#228;     &#186;&#208;&#228;    > 70 5B D0 E4 1C 01 00 00 80 BA D0 E4 1C 01 00 00 
{64} normal block at 0x0000011CE4D05670, 16 bytes long.
 Data: < &#234; &#202;&#246;           > 80 EA 90 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000011CE4D05A80, 16 bytes long.
 Data: <@&#233; &#202;&#246;           > 40 E9 90 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000011CE4D053F0, 16 bytes long.
 Data: <&#248;W &#202;&#246;           > F8 57 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000011CE4D05620, 16 bytes long.
 Data: <&#216;W &#202;&#246;           > D8 57 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000011CE4D05C10, 16 bytes long.
 Data: <P  &#202;&#246;           > 50 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000011CE4D05A30, 16 bytes long.
 Data: <0  &#202;&#246;           > 30 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000011CE4D05DA0, 16 bytes long.
 Data: <&#224;  &#202;&#246;           > E0 02 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000011CE4D053A0, 16 bytes long.
 Data: <   &#202;&#246;           > 10 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000011CE4D059E0, 16 bytes long.
 Data: <p  &#202;&#246;           > 70 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000011CE4D05990, 16 bytes long.
 Data: < &#192;&#139;&#202;&#246;           > 18 C0 8B CA F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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