Task 38677269

Name test_769-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND0276_0
Workunit 31619149
Created 26 Oct 2026, 13:48:20 UTC
Sent 26 Oct 2026, 13:48:29 UTC
Report deadline 31 Oct 2026, 13:48:29 UTC
Received 26 Oct 2026, 14:39:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654841
Run time 28 min 31 sec
CPU time 26 min 17 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 29,325.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 706.77 MB
Peak swap size 8.42 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
16:09:21 (216): wrapper (7.9.26016): starting
16:09:21 (216): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:09:22 (216): Library/usr/bin/tar.exe exited; CPU time 0.015625
16:09:22 (216): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
16:37:11 (216): C:/Windows/system32/cmd.exe exited; CPU time 1577.453125
16:37:11 (216): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 22383799 bytes.
Dumping objects ->
{3835233} normal block at 0x000001CA70AB1CE0, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835222} normal block at 0x000001CA70AB1180, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x000001CA70AB1490, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835200} normal block at 0x000001CA70AB1110, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835189} normal block at 0x000001CA70AB1A40, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835158} normal block at 0x000001CA70B5C240, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835147} normal block at 0x000001CA70C02BE0, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835144} normal block at 0x000001CA6EF767D0, 8 bytes long.
 Data: <  &#242;n&#202;   > 00 00 F2 6E CA 01 00 00 
{3834543} normal block at 0x000001CA70C02E80, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833946} normal block at 0x000001CA6EF773B0, 8 bytes long.
 Data: <&#224;W&#196;p&#202;   > E0 57 C4 70 CA 01 00 00 
..\zip\boinc_zip.cpp(122) : {302} normal block at 0x000001CA6EF81430, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001CA6EF6CF20, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{286} normal block at 0x000001CA6EF82AB0, 16 bytes long.
 Data: <(9&#248;n&#202;           > 28 39 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001CA6EF83140, 16 bytes long.
 Data: < 9&#248;n&#202;           > 00 39 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001CA6EF7D1D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{283} normal block at 0x000001CA6EF828D0, 16 bytes long.
 Data: <&#216;8&#248;n&#202;           > D8 38 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001CA6EF830A0, 16 bytes long.
 Data: <&#176;8&#248;n&#202;           > B0 38 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001CA6EF823D0, 16 bytes long.
 Data: < 8&#248;n&#202;           > 88 38 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001CA6EF82E20, 16 bytes long.
 Data: <`8&#248;n&#202;           > 60 38 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001CA6EF7E270, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{278} normal block at 0x000001CA6EF82880, 16 bytes long.
 Data: <&#184;&#206;&#246;n&#202;           > B8 CE F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001CA6EF7CFF0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{276} normal block at 0x000001CA6EF827E0, 16 bytes long.
 Data: < &#206;&#246;n&#202;           > 90 CE F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001CA6EF82A60, 16 bytes long.
 Data: <h&#206;&#246;n&#202;           > 68 CE F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001CA6EF82790, 16 bytes long.
 Data: <@&#206;&#246;n&#202;           > 40 CE F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001CA6EF824C0, 16 bytes long.
 Data: < &#206;&#246;n&#202;           > 18 CE F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001CA6EF82E70, 16 bytes long.
 Data: <&#240;&#205;&#246;n&#202;           > F0 CD F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001CA6EF82970, 16 bytes long.
 Data: <&#200;&#205;&#246;n&#202;           > C8 CD F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001CA6EF7D170, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{268} normal block at 0x000001CA6EF82830, 16 bytes long.
 Data: <&#160;&#205;&#246;n&#202;           > A0 CD F6 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001CA6EF6CDA0, 320 bytes long.
 Data: <0(&#248;n&#202;   p&#209;&#247;n&#202;   > 30 28 F8 6E CA 01 00 00 70 D1 F7 6E CA 01 00 00 
{266} normal block at 0x000001CA6EF82D80, 16 bytes long.
 Data: <@8&#248;n&#202;           > 40 38 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001CA6EF82290, 16 bytes long.
 Data: < 8&#248;n&#202;           > 18 38 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001CA6EF7D590, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{263} normal block at 0x000001CA6EF82560, 16 bytes long.
 Data: <&#240;7&#248;n&#202;           > F0 37 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001CA6EF7CF30, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{261} normal block at 0x000001CA6EF82380, 16 bytes long.
 Data: <87&#248;n&#202;           > 38 37 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001CA6EF82A10, 16 bytes long.
 Data: < 7&#248;n&#202;           > 10 37 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001CA6EF822E0, 16 bytes long.
 Data: <&#232;6&#248;n&#202;           > E8 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001CA6EF82330, 16 bytes long.
 Data: <&#192;6&#248;n&#202;           > C0 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001CA6EF82420, 16 bytes long.
 Data: < 6&#248;n&#202;           > 98 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001CA6EF82DD0, 16 bytes long.
 Data: <p6&#248;n&#202;           > 70 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000001CA6EF82740, 16 bytes long.
 Data: < &#226;&#247;n&#202;           > 00 E2 F7 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001CA6EF7E200, 40 bytes long.
 Data: <@'&#248;n&#202;   @&#194;&#181;p&#202;   > 40 27 F8 6E CA 01 00 00 40 C2 B5 70 CA 01 00 00 
{252} normal block at 0x000001CA6EF82B50, 16 bytes long.
 Data: <P6&#248;n&#202;           > 50 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000001CA6EF83000, 16 bytes long.
 Data: <(6&#248;n&#202;           > 28 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000001CA6EF7D050, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{249} normal block at 0x000001CA6EF82D30, 16 bytes long.
 Data: < 6&#248;n&#202;           > 00 36 F8 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{248} normal block at 0x000001CA6EF83600, 992 bytes long.
 Data: <0-&#248;n&#202;   P&#208;&#247;n&#202;   > 30 2D F8 6E CA 01 00 00 50 D0 F7 6E CA 01 00 00 
{84} normal block at 0x000001CA6EF7D770, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{83} normal block at 0x000001CA6EF76F50, 16 bytes long.
 Data: <@&#224;&#247;n&#202;           > 40 E0 F7 6E CA 01 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x000001CA6EF7E040, 40 bytes long.
 Data: <Po&#247;n&#202;   p&#215;&#247;n&#202;   > 50 6F F7 6E CA 01 00 00 70 D7 F7 6E CA 01 00 00 
{61} normal block at 0x000001CA6EF76B90, 16 bytes long.
 Data: < &#234;w&#167;&#246;           > 80 EA 77 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001CA6EF77130, 16 bytes long.
 Data: <@&#233;w&#167;&#246;           > 40 E9 77 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001CA6EF76EB0, 16 bytes long.
 Data: <&#248;Wt&#167;&#246;           > F8 57 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001CA6EF77360, 16 bytes long.
 Data: <&#216;Wt&#167;&#246;           > D8 57 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001CA6EF76B40, 16 bytes long.
 Data: <P t&#167;&#246;           > 50 04 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001CA6EF774F0, 16 bytes long.
 Data: <0 t&#167;&#246;           > 30 04 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000001CA6EF77220, 16 bytes long.
 Data: <&#224; t&#167;&#246;           > E0 02 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000001CA6EF76E60, 16 bytes long.
 Data: <  t&#167;&#246;           > 10 04 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000001CA6EF77680, 16 bytes long.
 Data: <p t&#167;&#246;           > 70 04 74 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000001CA6EF76AF0, 16 bytes long.
 Data: < &#192;r&#167;&#246;           > 18 C0 72 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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